Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
PDBsum entry 1k83
Go to PDB code:
Ligand/metal interactions
PDB id
1k83
Ligand highlighted
ILX-TRX-GLY-ILE-
GLY-CSX-ASN-HYP
Ligands
ILX-TRX-GLY-ILE-
GLY-CSX-ASN-HYP
ILX 1(M) to HYP 8(M)
Metals
_MN
MN 3009(A)
_ZN
×8
ZN 3007(B)
ZN 3002(C)
ZN 3004(I)
ZN 3001(J)
ZN 3005(L)
ZN 3006(A)
ZN 3008(A)
ZN 3003(I)
Ligand
ILX-TRX-GLY-ILE-GLY-CSX-ASN-HYP
ILX
-
4,5-Dihydroxyisoleucine
Formula:
C
6
H
13
NO
4
TRX
-
6-Hydroxytryptophan
Formula:
C
11
H
12
N
2
O
3
CSX
-
S-Oxy cysteine
Formula:
C
3
H
7
NO
3
S
HYP
-
4-Hydroxyproline [Hydroxyproline]
Formula:
C
5
H
9
NO
3
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ILX 1(M)
11
11
1
1
Complete
Chiral checks - OK
TRX 2(M)
16
16
1
1
Complete
Chiral checks - OK
GLY 3(M)
5
-
-
-
Residue too small to validate
ILE 4(M)
9
9
1
1
Complete
Chiral checks - OK
GLY 5(M)
5
-
-
-
Residue too small to validate
CSX 6(M)
8
8
1
1
Complete
Chiral checks - OK
ASN 7(M)
9
9
1
1
Complete
Chiral checks - OK
HYP 8(M)
9
9
1
1
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
ILX 1(M)
-
0
TRX 2(M)
-
0
GLY 3(M)
-
0
ILE 4(M)
-
0
GLY 5(M)
-
0
CSX 6(M)
-
0
ASN 7(M)
-
0
HYP 8(M)
O: OXT
1
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
Use mouse to move/zoom
3D Viewers:
LIGPLOT
of interactions involving ligand ILX-TRX-GLY-ILE-GLY-CSX-ASN-HYP
List of
interactions
ILX 1(M) to HYP 8(M)
_MN
_ZN
×8
