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PDBsum entry 1j4l
Go to PDB code:
Ligand/metal interactions
PDB id
1j4l
Ligand highlighted
GLU-VAL-GLU-LEU-
TPO-GLN-GLU-LEU-
PRO
Ligands
GLU-VAL-GLU-LEU-
TPO-GLN-GLU-LEU-
PRO
GLU 599(P) to PRO 607(P)
Ligand
GLU-VAL-GLU-LEU-TPO-GLN-GLU-LEU-PRO
-
Phosphothreonine
[Phosphonothreonine]
Formula:
C
4
H
10
NO
6
P
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLU 599(P)
10
10
1
1
Complete
Chiral checks - OK
VAL 600(P)
8
8
1
1
Complete
Chiral checks - OK
GLU 601(P)
10
10
1
1
Complete
Chiral checks - OK
LEU 602(P)
9
9
1
1
Complete
Chiral checks - OK
TPO 603(P)
12
12
1
1
Complete
Chiral checks - OK
GLN 604(P)
10
10
1
1
Complete
Chiral checks - OK
GLU 605(P)
10
10
1
1
Complete
Chiral checks - OK
LEU 606(P)
9
9
1
1
Complete
Chiral checks - OK
PRO 607(P)
8
8
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GLU 599(P)
O: OXT
1
VAL 600(P)
-
0
GLU 601(P)
O: OXT
1
LEU 602(P)
-
0
TPO 603(P)
-
0
GLN 604(P)
-
0
GLU 605(P)
OE2: OE1
|
OE1: OE2
2
LEU 606(P)
O: OXT
1
PRO 607(P)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLU-VAL-GLU-LEU-TPO-GLN-GLU-LEU-PRO
List of
interactions
GLU 599(P) to PRO 607(P)
