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PDBsum entry 1fcv
Go to PDB code:
Ligand/metal interactions
PDB id
1fcv
Ligand highlighted
GCU-NAG-GCU-NAG-
GCU
Ligands
GCU-NAG-GCU-NAG-
GCU
GCU 1(B) to GCU 5(B)
Ligand
GCU-NAG-GCU-NAG-GCU
GCU
-
Alpha-D-Glucopyranuronic acid [Alpha-D-Glucuronic acid; d-Glucuronic acid; glucuronic acid]
Formula:
C
6
H
10
O
7
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GCU 1(B)
13
4
3
0
9
1
-
-
-
-
NAG 2(B)
15
15
1
0
0
0
0
0
1
0
GCU 3(B)
13
13
1
0
0
0
0
0
1
0
NAG 4(B)
15
15
1
0
0
0
0
0
0
0
GCU 5(B)
13
13
1
0
0
0
0
0
1
0
Advanced Analysis
Residue
Name Mismatches
Count
GCU 1(B)
O4: O6B
1
NAG 2(B)
-
0
GCU 3(B)
O6B: O6A
|
O6A: O6B
2
NAG 4(B)
-
0
GCU 5(B)
O6B: O6A
|
O6A: O6B
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GCU-NAG-GCU-NAG-GCU
List of
interactions
GCU 1(B) to GCU 5(B)
