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PDBsum entry 1fbv
Go to PDB code:
Ligand/metal interactions
PDB id
1fbv
Ligand highlighted
SER-ASP-GLY-PTR-
THR-PRO-GLU-PRO-
ALA
Ligands
SER-ASP-GLY-PTR-
THR-PRO-GLU-PRO-
ALA
SER 4(B) to ALA 12(B)
SO4
×5
SO4 2001(A)
SO4 2002(A)
SO4 2003(A)
SO4 2004(A)
SO4 2005(A)
Metals
_ZN
×2
ZN 1001(A)
ZN 1002(A)
Ligand
SER-ASP-GLY-PTR-THR-PRO-GLU-PRO-ALA
-
O-Phosphotyrosine
[Phosphonotyrosine]
Formula:
C
9
H
12
NO
6
P
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
SER 4(B)
7
7
1
1
Complete
Chiral checks - OK
ASP 5(B)
9
9
1
1
Complete
Chiral checks - OK
GLY 6(B)
5
-
-
-
Residue too small to validate
PTR 7(B)
17
17
1
1
Complete
Chiral checks - OK
THR 8(B)
8
8
1
1
Complete
Chiral checks - OK
PRO 9(B)
8
8
1
1
Complete
Chiral checks - OK
GLU 10(B)
10
10
1
1
Complete
Chiral checks - OK
PRO 11(B)
8
8
1
1
Complete
Chiral checks - OK
ALA 12(B)
6
-
-
-
Residue too small to validate
Advanced Analysis
Residue
Name Mismatches
Count
SER 4(B)
-
0
ASP 5(B)
OD2: OD1
|
OD1: OD2
2
GLY 6(B)
-
0
PTR 7(B)
O3P: O1P
|
O1P: O2P
2
THR 8(B)
-
0
PRO 9(B)
-
0
GLU 10(B)
-
0
PRO 11(B)
-
0
ALA 12(B)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's reactant protein lysine with similarity 50.00%
LIGPLOT
of interactions involving ligand SER-ASP-GLY-PTR-THR-PRO-GLU-PRO-ALA
List of
interactions
SER 4(B) to ALA 12(B)
_ZN
×2
