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PDBsum entry 1evd
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Ligand/metal interactions PDB id
1evd
ACB-VAL-1ZN-FGA-
MDH

Ligands
ACB-VAL-1ZN-FGA-
MDH
ACB 1(A) to MDH 5(A)
  
Ligand ACB-VAL-1ZN-FGA-MDH

ACB - 3-Methyl-Beta-D-Aspartic acid [(3s)-3-Methyl-D-Aspartic acid; d-Methyl aspartic acid] Formula: C5H9NO4
1ZN - (2s,3s,4e,6e,8s,9s)-3-Amino-9-Methoxy-2,6,8-Trimethyl- 10-Phenyldeca-4,6-Dienoic acid Formula: C20H29NO3
FGA - Gamma-D-Glutamic acid [D-Glutamic acid] Formula: C5H9NO4
MDH - N-Methyldehydrobutyrine Formula: C5H9NO2
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
ACB 1(A) 10 10 1 1 0 0 0 0 0 0
VAL 2(A) 8 8 1 1 0 0 0 0 0 0
1ZN 3(A) 24 24 1 1 0 0 0 0 0 0
FGA 4(A) 10 9 1 1 1 0 - - - -
MDH 5(A) 8 8 2 1 0 0 0 0 0 0
Advanced Analysis
Residue Name Mismatches Count
ACB 1(A) OXT: O|O: OXT|OD2: OD1 3
VAL 2(A) - 0
1ZN 3(A) O3: OXT 1
FGA 4(A) O: OXT 1
MDH 5(A) - 0
Additional Information
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LIGPLOT of interactions involving ligand ACB-VAL-1ZN-FGA-MDH

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List of
interactions
 

ACB 1(A) to MDH 5(A)
  
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