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PDBsum entry 1efx
Go to PDB code:
Ligand/metal interactions
PDB id
1efx
Ligand highlighted
GLY-ALA-VAL-ASP-
PRO-LEU-LEU-ALA-
LEU
Ligands
GLY-ALA-VAL-ASP-
PRO-LEU-LEU-ALA-
LEU
GLY 1(C) to LEU 9(C)
Ligand
GLY-ALA-VAL-ASP-PRO-LEU-LEU-ALA-LEU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLY 1(C)
5
-
-
-
Residue too small to validate
ALA 2(C)
6
-
-
-
Residue too small to validate
VAL 3(C)
8
8
1
1
Complete
Chiral checks - OK
ASP 4(C)
9
9
1
1
Complete
Chiral checks - OK
PRO 5(C)
8
8
1
1
Complete
Chiral checks - OK
LEU 6(C)
9
9
1
1
Complete
Chiral checks - OK
LEU 7(C)
9
9
1
1
Complete
Chiral checks - OK
ALA 8(C)
6
-
-
-
Residue too small to validate
LEU 9(C)
9
9
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GLY 1(C)
-
0
ALA 2(C)
-
0
VAL 3(C)
-
0
ASP 4(C)
-
0
PRO 5(C)
-
0
LEU 6(C)
O: OXT
1
LEU 7(C)
O: OXT
1
ALA 8(C)
-
0
LEU 9(C)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
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Validator
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3D Viewers:
LIGPLOT
of interactions involving ligand GLY-ALA-VAL-ASP-PRO-LEU-LEU-ALA-LEU
List of
interactions
GLY 1(C) to LEU 9(C)
