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PDBsum entry 1eb1
Go to PDB code:
Ligand/metal interactions
PDB id
1eb1
Ligand highlighted
ASP-TYR-GLU-PRO-
ILE-PRO-GLU-GLU-
ALA-PHE
Ligands
ASP-TYR-GLU-PRO-
ILE-PRO-GLU-GLU-
ALA-PHE
ASP 10(A) to PHE 19(A)
ZAL-PRO-MMO
ZAL 1(B) to MMO 3(B)
Ligand
ASP-TYR-GLU-PRO-ILE-PRO-GLU-GLU-ALA-PHE
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ASP 10(A)
9
9
1
1
Complete
Chiral checks - OK
TYR 11(A)
13
13
1
1
Complete
Chiral checks - OK
GLU 12(A)
10
10
1
1
Complete
Chiral checks - OK
PRO 13(A)
8
8
1
1
Complete
Chiral checks - OK
ILE 14(A)
9
9
1
1
Complete
Chiral checks - OK
PRO 15(A)
8
8
1
1
Complete
Chiral checks - OK
GLU 16(A)
10
10
1
1
Complete
Chiral checks - OK
GLU 17(A)
10
10
1
1
Complete
Chiral checks - OK
ALA 18(A)
6
-
-
-
Residue too small to validate
PHE 19(A)
12
12
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
ASP 10(A)
OD2: OD1
|
OD1: OD2
2
TYR 11(A)
O: OXT
1
GLU 12(A)
OE2: OE1
|
OE1: OE2
2
PRO 13(A)
-
0
ILE 14(A)
-
0
PRO 15(A)
-
0
GLU 16(A)
-
0
GLU 17(A)
O: OXT
1
ALA 18(A)
-
0
PHE 19(A)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
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3D Viewers:
LIGPLOT
of interactions involving ligand ASP-TYR-GLU-PRO-ILE-PRO-GLU-GLU-ALA-PHE
List of
interactions
ASP 10(A) to PHE 19(A)
