PDBsum entry 1dgd

Ligand/metal interactions

PDB id

1dgd

Ligands

PLP

PLP 437(A)

MES

MES 434(A)

Metals

_NA

NA 435(A)

_LI

LI 436(A)

Ligand PLP - Pyridoxal-5'-Phosphate
[Vitamin b6 phosphate]
Formula: C₈H₁₀NO₆P

Validation of ligand annotation

Per Residue Validation

Advanced Analysis

Residue	Name Mismatches	Count
PLP 437(A)	O2P: O1P\|O1P: O2P	2

Additional Information

Validation carried out using MotiveValidator. Full validation report can be found in Validator^DB.

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Ligand matches this enzyme's cofactor pyridoxal 5'-phosphate with similarity 93.75%

LIGPLOT of interactions involving ligand PLP

List of
interactions

PLP 437(A)