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PDBsum entry 1azx
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Ligand/metal interactions PDB id
1azx
2 instances of ligand highlighted
Z9L-Z9K-GU6-GU1-
Z9H
Ligands
Z9L-Z9K-GU6-GU1-
Z9H ×2
Z9L 1(A) to Z9H 5(A)
NAG ×3
NAG 501(I)
NAG 502(L)
  
Ligand Z9L-Z9K-GU6-GU1-Z9H

Z9L - Methyl 2,3,6-Tri-O-Sulfo-Alpha-D-Glucopyranoside Formula: C7H14O15S3
Z9K - 3-O-Methyl-2-O-Sulfo-Alpha-L-Idopyranuronic acid Formula: C7HOO10S
GU6 - 2,3,6-Tri-O-Sulfo-Alpha-D-Glucopyranose [2,3,6-Tri-O-Sulfonato-Alpha-D-Glucopyranose; 2,3,6-Tri- O-Sulfo-Alpha-D-Glucose; 2,3,6-Tri-O-Sulfo-D-Glucose; 2,3,6-Tri-O-Sulfo-Glucose] Formula: C6H12O15S3
GU1 - 2,3-Di-O-Methyl-Beta-D-Glucopyranuronic acid [2,3-Di-O-Methyl-Beta-D-Glucuronic acid; 2,3-Di-O- Methyl-D-Glucuronic acid; 2,3-Di-O-Methyl-Glucuronic acid] Formula: C8H14O7
Z9H - 3,4-Di-O-Methyl-2,6-Di-O-Sulfo-Alpha-D-Glucopyranose Formula: C8H16O12S2
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
Z9L 1(A) 25 25 0 0 Complete Chiral checks - OK
Z9K 2(A) 18 18 1 0 Complete Chiral checks - OK
GU6 3(A) 24 24 1 0 Complete Chiral checks - OK
GU1 4(A) 15 15 1 0 Complete Chiral checks - OK
Z9H 5(A) 22 22 1 0 Complete Chiral checks - OK
Advanced Analysis
Residue Name Mismatches Count
Z9L 1(A) - 0
Z9K 2(A) - 0
GU6 3(A) O15: O13|O13: O14|O21: O19|O19: O21 4
GU1 4(A) - 0
Z9H 5(A) - 0
Additional Information
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LIGPLOT of interactions involving ligand Z9L-Z9K-GU6-GU1-Z9H

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List of
interactions
 

Z9L 1(A) to Z9H 5(A)

(also representing equivalent ligand Z9L 1(B) to Z9H 5(B) )
  
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