Sequence alignment between 2k5d(A) and UniProt seq Q8E006 (Q8E006_STRA5):

Q8E006 (Q8E006_STRA5): Conjugative transposon protein from Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R) 
                 10        20        30        40        50        60        70        80        90       100       110       120        
         ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+--------
UniProt: MMRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTKDSSSFKAQPQAKKEPTQDK
         ............................................................................................................XX..................
PDB seq: MMRLANGIVLDKDTTFGELKFSALRREVRIQNEDGSVSDEIKERTYDLKSKGQGRMIQVSIPASVPLKEFDYNARVELINPIADTVATATYQGADVDWYIKADDIVLTLE------------------
         ---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+---------+                  
                 10        20        30        40        50        60        70        80        90       100       110