Figure 3 - full size

Figure 3.
Crystal structures of the six-helix bundles formed by NHR α-peptide 1 in complex with α-peptide 3, α/β-peptide 10, or chimeric α/β-peptide 8. (A) Views from the side and looking down the superhelical axis of the indicated six-helix bundles. NHR helices are colored gray, CHR helices are colored by residue type (yellow for α, cyan for β^3, and red for cyclic β). (B) Overlay of the all α-peptide helix bundle formed 1+3 with that formed by 1+10 or 1+8. The CHR helix from 1+3 is colored green; otherwise, coloring is the same as in A. In A and B, the structures viewed from the side are oriented with the CHR N terminus at the top of the page; the structures viewed down the superhelical axis are oriented with the CHR N terminus projecting out of the page. (C) Packing interactions of CHR residues Trp[3], Trp[6], and Ile[10] (shown as sticks) against the NHR core trimer (shown as surface) in the structures of 1+3, 1+10, and 1+8; in the structure of 1+10, neither Trp[3] nor Trp[6] was resolved in electron density past C[β], and a molecule of glycerol (shown as sticks) was observed in the Trp[6] binding cavity. Coloring is the same as in A.