Figure 2 - full size

Figure 2.
Figure 2. Substrate Recognition in the a Subunit
(A) Local structures around the adenine base binding site in the a subunit, observed in forms I (red) and V (orange, green). The bound ligand is acetyl-CoA, which is an analog of 3-hydroxyacyl-CoA.
(B and C) The corresponding structures of the (B) proximal and (C) distal subunits in form II.
(D) Superimposition of the two a subunits in the apparently symmetric form I, in which the acetyl-CoA (the red space-filling model) was observed. The ligand bound subunit (red) is more open than the unliganded one (blue). As a consequence, only the aC domain exhibits a significant difference. The circle with the broken line indicates the adenine base moiety in (A).