Figure 1 - full size

Figure 1.
FIGURE 1. Schematic representation of QAW strategy. A[1], A[2], A[i], A[j], A[k], and A[n] represent the 1st, 2nd, i-th, j-th, k-th, and n-th amino acids of the protein sequence with n amino acids, respectively. The mutant data base at the i-th position (i = 1, 2, i, j, k, and n) represents the effect of amino acid replacement at the corresponding i-th position on a specific function to be improved, such as activity, conformational stability, thermal stability, etc. By looking at each data base, three amino acids (at most) that represent the top three scores in terms of the desired function are considered for further mutations. The term quasi-additive is based on the postulation of a rough (not strict) additivity of the adaptive walking by combinatorial search for better mutant proteins.