_EC 4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. 73 PDB entries  
EC 4.-.-.- Lyases. [10,244 PDB entries]
EC 4.6.-.- Phosphorus-oxygen lyases. [904 PDB entries]
EC 4.6.1.- Phosphorus-oxygen lyases. [904 PDB entries]
EC 4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. [73 PDB entries]
1gx1

Reaction: 4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4- cyclic diphosphate + Cmp.
 

4-CDP-2-C-methyl-D-erythritol 2-phosphate
= 2-C-methyl-D-erythritol 2,4- cyclic diphosphate
+
CMP
Molecule diagrams generated from .mol files obtained from the KEGG ftp site.

Other name(s): MECDP-synthase.
Comments: Forms part of an alternative nonmevalonate pathway for terpenoid biosynthesis.
Links:   [IntEnz]   [ExPASy]   [KEGG]  

There are 73 PDB entries in enzyme class E.C.4.6.1.12

  PDB code Protein
1gx1
Structure of 2c-methyl-d-erythritol-2,4-cyclodiphosphate synthase
Source: Escherichia coli. Organism_taxid: 511693. Strain: bl21. Expressed in: escherichia coli. Expression_system_taxid: 562. Other_details: synthetic gene
Chains: A, B, C (157 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CDP is 84.00% similar to enzyme product CMP
1h47
Structures of mecp synthase in complex with (i) cmp and (ii) cmp and product
Source: Escherichia coli. Organism_taxid: 511693. Strain: bl21. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Chains: A, B, C, D, E, F (157 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
1h48
The structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase in complex with cmp and product
Source: Escherichia coli. Organism_taxid: 511693. Strain: bl21. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Chains: A, B, C, D, E, F (157 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
1iv1
Structure of 2c-methyl-d-erythritol-2,4-cyclodiphosphate synthase
Source: Thermus thermophilus. Organism_taxid: 274. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, C, D, B, E, F (150 residues) CATH domain: 3.30.1330.50
1iv2
Structure of 2c-methyl-d-erythritol-2,4-cyclodiphosphate synthase (bound form cdp)
Source: Thermus thermophilus. Organism_taxid: 274. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E, F (150 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CDP is 84.00% similar to enzyme product CMP
1iv3
Structure of 2c-methyl-d-erythritol-2,4-cyclodiphosphate synthase (bound form mg atoms)
Source: Thermus thermophilus. Organism_taxid: 274. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E, F (150 residues) CATH domain: 3.30.1330.50
1iv4
Structure of 2c-methyl-d-erythritol-2,4-cyclodiphosphate synthase (bound form substrate)
Source: Thermus thermophilus. Organism_taxid: 274. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E, F (150 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
1jn1
Structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from haemophilus influenzae (hi0671)
Source: Haemophilus influenzae. Organism_taxid: 727. Gene: ispf. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C (157 residues) CATH domain: 3.30.1330.50
1jy8
2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (ispf)
Source: Escherichia coli. Organism_taxid: 562. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: A (155 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
1knj
Co-crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (ispf) from e. Coli involved in mevalonate-independent isoprenoid biosynthesis, complexed with cmp/mecdp/mn2+
Source: Escherichia coli. Organism_taxid: 562. Gene: ispf. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chain: A (156 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
1knk
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (ispf) from e. Coli involved in mevalonate-independent isoprenoid biosynthesis
Source: Escherichia coli. Organism_taxid: 562. Gene: ispf. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chain: A (156 residues) CATH domain: 3.30.1330.50
1t0a
Crystal structure of 2c-methyl-d-erythritol-2,4-cyclodiphosphate synthase from shewanella oneidensis
Source: Shewanella oneidensis. Organism_taxid: 211586. Strain: mr-1. Gene: ispf. Expressed in: escherichia coli k12. Expression_system_taxid: 83333.
Chains: A, B, C (158 residues) CATH domain: 3.30.1330.50
1u3l
Ispf with mg and cdp
Source: Escherichia coli. Organism_taxid: 562. Gene: ispf. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: A (155 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CDP is 84.00% similar to enzyme product CMP
1u3p
Ispf native
Source: Escherichia coli. Organism_taxid: 562. Gene: ispf, mecs. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: A (155 residues) CATH domain: 3.30.1330.50
1u40
Ispf with 4-diphosphocytidyl-2c-methyl-d-erythritol
Source: Escherichia coli. Organism_taxid: 562. Gene: ispf. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: A (155 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CDM is 63.64% similar to enzyme product CMP
1u43
Ispf with 4-diphosphocytidyl-2c-methyl-d-erythritol 2-phosphate
Source: Escherichia coli. Organism_taxid: 562. Gene: ispf, mecs. Expressed in: escherichia coli. Expression_system_taxid: 562
Chain: A (155 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group SUD is 56.76% similar to enzyme product CMP
1vh8
Crystal structure of a 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase
Source: Haemophilus influenzae. Organism_taxid: 727. Gene: ispf, hi0671. Expressed in: escherichia coli. Expression_system_taxid: 562
Chains: A, B, C, D, E, F (153 residues) CATH domain: 3.30.1330.50
1vha
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase
Source: Haemophilus influenzae. Organism_taxid: 727. Gene: ispf, hi0671. Expressed in: escherichia coli. Expression_system_taxid: 562
Chains: A, B, C, D, E, F (153 residues) CATH domain: 3.30.1330.50
1w55
Structure of the bifunctional ispdf from campylobacter jejuni
Source: Campylobacter jejuni. Organism_taxid: 197. Strain: jejuni ntct 11168. Atcc: 33560. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Chain: A (369 residues) CATH domains: 3.90.550.10 3.30.1330.50
Bound ligand:   Het Group C corresponds to enzyme product CMP
1w57
Structure of the bifunctional ispdf from campylobacter jejuni containing zn
Source: Campylobacter jejuni. Organism_taxid: 197. Strain: jejuni ntct 11168. Atcc: 33560. Expressed in: escherichia coli. Expression_system_taxid: 511693.
Chain: A (368 residues) CATH domains: 3.90.550.10 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
1yqn
E. Coli ispf double mutant
Source: Escherichia coli. Organism_taxid: 562. Gene: ispf. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chain: A (158 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CDP is 84.00% similar to enzyme product CMP
2amt
Structure of 2c-methyl-d-erythritol 2,4-clycodiphosphate synthase complexed with a cdp derived fluorescent inhibitor
Source: Escherichia coli. Organism_taxid: 562. Gene: ispf, mecs. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693.
Chains: A, B, C, D, E, F (156 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group 1AA is 56.76% similar to enzyme product CMP
2gzl
Structure of 2c-methyl-d-erythritol 2,4-clycodiphosphate synthase complexed with a cdp derived fluorescent inhibitor
Source: Escherichia coli. Organism_taxid: 562. Gene: ispf, mecs. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693.
Chain: A (159 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group 2AA is 47.73% similar to enzyme product CMP
2pmp
Structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from the isoprenoid biosynthetic pathway of arabidopsis thaliana
Source: Arabidopsis thaliana. Thale cress. Organism_taxid: 3702. Strain: ecotype columbia 0. Gene: ispf. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (160 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
2uzh
Mycobacterium smegmatis 2c-methyl-d-erythritol-2,4-cyclodiphosphate synthase (ispf)
Source: Mycobacterium smegmatis. Organism_taxid: 1772. Strain: mc(2)155. Atcc: 700084. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Chains: A, B, C (153 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CDP is 84.00% similar to enzyme product CMP
3b6n
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase pv003920 from plasmodium vivax
Source: Plasmodium vivax sai-1. Organism_taxid: 126793. Strain: salvador i. Gene: pv003920, pvx_003920. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (150 residues) CATH domain: 3.30.1330.50
3elc
Crystal structure of 2c-methyl-d-erythritol 2,4-clycodiphosphate synthase complexed with ligand
Source: Escherichia coli k-12. Organism_taxid: 83333. Strain: k12. Gene: ispf. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C (157 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group F01 is 77.27% similar to enzyme product CMP
3eor
Crystal structure of 2c-methyl-d-erythritol 2,4-clycodiphosphate synthase complexed with ligand
Source: Escherichia coli k-12. Organism_taxid: 83333. Strain: k12. Gene: ispf. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chain: A (157 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CFV is 50.00% similar to enzyme product CMP
3ern
Crystal structure of 2c-methyl-d-erythritol 2,4-clycodiphosphate synthase complexed with aracmp
Source: Escherichia coli k-12. Organism_taxid: 83333. Strain: k12. Gene: ispf. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C, D, E, F (157 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CAR corresponds to enzyme product CMP
3esj
Crystal structure of 2c-methyl-d-erythritol 2,4-clycodiphosphate synthase complexed with ligand
Source: Escherichia coli k-12. Organism_taxid: 83333. Strain: k12. Gene: ispf. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chain: A (162 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CC7 is 95.24% similar to enzyme product CMP
3f0d
High resolution crystal structure of 2c-methyl-d-erythritol 2,4- cyclodiphosphatase synthase from burkholderia pseudomallei
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E, F (155 residues) CATH domain: 3.30.1330.50
3f0e
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (158 residues) CATH domain: 3.30.1330.50
3f0f
Co-crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei with hydrolyzed cdp
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (159 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
3f0g
Co-crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase with cmp
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E, F (159 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
3f6m
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase ispf from yersinia pestis
Source: Yersinia pestis. Organism_taxid: 214092. Strain: co92. Gene: ispf, y0829, ypo3360, yp_0327. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (161 residues) CATH domain: 3.30.1330.50
3fba
Crystal structure of 2c-methyl-d-erythritol 2,4-clycodiphosphate synthase complexed with ligand
Source: Escherichia coli. Organism_taxid: 83333. Gene: ispf. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (158 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C6B corresponds to enzyme product CMP
3fpi
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase ispf complexed with cytidine triphosphate
Source: Yersinia pestis. Organism_taxid: 214092. Strain: co92. Gene: ispf, y0829, ypo3360, yptb0771, yp_0327. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chain: A (161 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CTP is 72.41% similar to enzyme product CMP
3ghz
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from salmonella typhimurium
Source: Salmonella typhimurium. Organism_taxid: 602. Strain: lt2. Gene: ispf, stm2929. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (157 residues) CATH domain: 3.30.1330.50
3ieq
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei with cytidine
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (158 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CTN is 80.95% similar to enzyme product CMP
3iew
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei with bound ctp and cdp
Source: Burkholderia pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (160 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CDP is 84.00% similar to enzyme product CMP
3ike
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei with cytosine
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (158 residues) CATH domain: 3.30.1330.50
3ikf
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei with fol fragment 717, imidazo[2,,1-b][1,3]thiazol-6-ylmethanol
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (158 residues) CATH domain: 3.30.1330.50
3jvh
Crystal structure of 2c-methyl-d-erythritol-2,4-cyclodiphosphate synthase from burkholderia pseudomallei with fol fragment 8395
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (158 residues) CATH domain: 3.30.1330.50
3k14
Co-crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei with fol fragment 535, ethyl 3-methyl-5,6-dihydroimidazo[2,1-b][1,3]thiazole-2-carboxylate
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (158 residues) CATH domain: 3.30.1330.50
3k2x
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei in complex with 5'-iodo- cytosine
Source: Burkholderia pseudomallei. Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (154 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group I5A is 72.73% similar to enzyme product CMP
3ke1
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei in complex with a fragment- nucleoside fusion d000161829
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (150 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group 829 is 53.33% similar to enzyme product CMP
3mbm
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei with cytosine and fol fragment 717, imidazo[2,1-b][1,3]thiazol-6-ylmethanol
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (158 residues) CATH domain: 3.30.1330.50
3p0z
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei with cytidine and fol955, 4- (1h-imidazol)-1-yl)phenol
Source: Burkholderia pseudomallei. Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (158 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CTN is 80.95% similar to enzyme product CMP
3p10
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei with cytidine and fol694, 2- (thiophen-2-yl)phenyl methanol
Source: Burkholderia pseudomallei. Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (159 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CTN is 80.95% similar to enzyme product CMP
3q8h
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei in complex with cytidine derivative ebsi01028
Source: Burkholderia pseudomallei. Pseudomonas pseudomallei. Organism_taxid: 28450. Strain: 1710b. Gene: ispf, mecs, bpsl2098. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (151 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group AO9 is 50.00% similar to enzyme product CMP
3qhd
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei bound to cytidine, fol795 and fol955
Source: Burkholderia pseudomallei. Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C (159 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CTN is 80.95% similar to enzyme product CMP
3re3
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from francisella tularensis
Source: Francisella tularensis subsp. Tularensis. Organism_taxid: 177416. Strain: schu s4. Gene: ftt_1128, ispf. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D (148 residues) CATH domain: 3.30.1330.50
3t80
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from salmonella typhimurium bound to cytidine
Source: Salmonella enterica subsp. Enterica serovar typhimurium. Organism_taxid: 90371. Strain: lt2. Gene: ispf, stm2929. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Chains: A, B, C, D, E, F (157 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CTN is 80.95% similar to enzyme product CMP
4c81
Ispf (plasmodium falciparum) cdp complex
Source: Plasmodium falciparum. Organism_taxid: 36329. Strain: 3d7. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: gold. Other_details: synthetic gene
Chain: A (156 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group CDP is 84.00% similar to enzyme product CMP
4c82
Ispf (plasmodium falciparum) unliganded structure
Source: Plasmodium falciparum. Organism_taxid: 36329. Strain: 3d7. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: gold.
Chain: A (156 residues) CATH domain: 3.30.1330.50
4c8e
Ispf (burkholderia cenocepacia) 2cmp complex
Source: Burkholderia cenocepacia. Organism_taxid: 216591. Strain: j2315. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: gold. Other_details: genomic DNA
Chains: A, B, C (161 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
4c8g
Ispf (burkholderia cenocepacia) cmp complex
Source: Burkholderia cenocepacia. Organism_taxid: 216591. Strain: j2315. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: gold. Other_details: genomic DNA
Chains: A, B, C (153 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
4c8i
Ispf (burkholderia cenocepacia) citrate complex
Source: Burkholderia cenocepacia. Organism_taxid: 216591. Strain: j2315. Expressed in: escherichia coli. Expression_system_taxid: 469008. Expression_system_variant: gold. Other_details: genomic DNA
Chains: A, B, C (149 residues) CATH domain: 3.30.1330.50
5b8f
X-ray crystal structure of a 2-c-methyl-d-erythritol 2,4- cyclodiphosphate synthase from pseudomonas aeruginosa
Source: Pseudomonas aeruginosa (strain atcc 15692 / pao1 / 1c / prs 101 / lmg 12228). Organism_taxid: 208964. Strain: atcc 15692 / pao1 / 1c / prs 101 / lmg 12228. Gene: ispf, pa3627. Expressed in: escherichia coli. Expression_system_taxid: 469008.
Chains: A, B, C (159 residues) CATH domain: 3.30.1330.50
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
5esv
Crystal structure of broadly neutralizing antibody ch03, isolated from donor ch0219, in complex with scaffolded trimeric HIV-1 env v1v2 domain from the cladE C superinfecting strain of donor cap256.
Source: Homo sapiens. Human. Organism_taxid: 9606. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_cell_line: expi293. Gene: igkc. Haemophilus influenzae, human immunodeficiency virus 1, haemophilus influenzae (strain atcc 51907 / dsm 11121 /
Chains: E, F, G (176 residues)
Bound ligand:   Het Group NAG is 52.17% similar to enzyme product CMP
5esz
Crystal structure of broadly neutralizing antibody ch04, isolated from donor ch0219, in complex with scaffolded trimeric HIV-1 env v1v2 domain from the clade ae strain a244
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: ighg1. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_cell_line: expi293. Gene: igkc. Haemophilus influenzae, human immunodeficiency
Chains: C, G (163 residues)
Bound ligand:   Het Group NAG is 52.17% similar to enzyme product CMP
5iwx
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from bacillus subtitis
Source: Bacillus subtilis (strain 168). Organism_taxid: 224308. Strain: 168. Gene: ispf, yacn, bsu00910. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E, F (158 residues)
5iwy
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from bacillus subtitis complexed with cmp and mg2+
Source: Bacillus subtilis (strain 168). Organism_taxid: 224308. Strain: 168. Gene: ispf, yacn, bsu00910. Expressed in: escherichia coli. Expression_system_taxid: 562.
Chains: A, B, C, D, E, F (158 residues)
Bound ligand:   Het Group C5P corresponds to enzyme product CMP
5l03
Crystal structure of 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase from burkholderia pseudomallei bound to l-tryptophan hydroxamate
Source: Burkholderia pseudomallei. Organism_taxid: 28450. Gene: ispf, dp46_3085, ers012314_03919, sy87_14040. Expressed in: escherichia coli. Expression_system_taxid: 562
Chains: A, B, C (158 residues)
5l12
Crystal structure of 2c-methyl-d-erythritol 2,4-clycodiphosphate synthase from burkholderia pseudomallei double mutant
Source: Burkholderia pseudomallei (strain 1106a). Organism_taxid: 357348. Strain: 1106a. Gene: ispf, burps1106a_2400. Expressed in: escherichia coli. Expression_system_taxid: 562
Chains: A, B, C (157 residues)
6mwf
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (ispf) burkholderia pseudomallei in complex with ligand hgn- 0459
Source: Burkholderia pseudomallei (strain 1710b). Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C (159 residues)
6mwi
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (ispf) burkholderia pseudomallei in complex with ligand hgn- 0456
Source: Burkholderia pseudomallei (strain 1710b). Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C (159 residues)
6mwj
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (ispf) burkholderia pseudomallei in complex with ligand hgn- 0863
Source: Burkholderia pseudomallei (strain 1710b). Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C (160 residues)
6mwk
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (ispf) burkholderia pseudomallei in complex with ligand hgn- 0883
Source: Burkholderia pseudomallei (strain 1710b). Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008.
Chains: A, B, C (160 residues)
6nmo
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (ispf) burkholderia pseudomallei in complex with ligand sr-4
Source: Burkholderia pseudomallei (strain 1710b). Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli 'bl21-gold(de3)plyss ag'. Expression_system_taxid: 469008.
Chains: A, B, C (159 residues)
6v3m
Crystal structure of 2c-methyl-d-erythritol 2,4-cyclodiphosphate synthase (ispf) burkholderia pseudomallei in compomplex with ligand hgn-0961 (bsi110840)
Source: Burkholderia pseudomallei (strain 1710b). Organism_taxid: 320372. Strain: 1710b. Gene: ispf, burps1710b_2511. Expressed in: escherichia coli 'bl21-gold(de3)plyss ag'. Expression_system_taxid: 866768.
Chains: A, B, C (160 residues)
8xhu
Crystal structure of helicobacter pylori ispdf
Source: Helicobacter pylori 26695. Organism_taxid: 85962. Gene: ispdf, hp_1020. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008
Chains: A, B, C (354 residues)
8xkf
Crystal structure of helicobacter pylori ispdf with substrate ctp
Source: Helicobacter pylori 26695. Organism_taxid: 85962. Gene: ispdf, hp_1020. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008
Chains: A, B, C, D, E, F (370 residues)
Bound ligand:   Het Group CTP is 72.41% similar to enzyme product CMP