Subsections

4 Output files

4.1 Log file

When FREGENE is executing, summary information describing the initial population, the simulation features and the evolution of the population over generations are sent to standard output, and can be redirected to a log file (see Example/log_example.xml).


4.2 Main output file (-o file_name; required)

The output file is formatted to enable its reuse as a -i input file. It contains the basic information as presented in Section 3.1. This file also contains variables required to ensure that, during iterated runs, FREGENE works with appropriate values. These variables detailed below and summarized in Table 1.


4.3 Other output files enabled by additional options

Other files can be generated if the corresponding option, from the following list, is selected by the user in the command line:

Imperial College -- August 2008