Proteomics MultiQC Analysis

๐Ÿ” Choose Analysis Type

Select how you want to analyze your proteomics data

๐Ÿ“ Upload Files

Upload your proteomics data files as ZIP archives (containing MaxQuant, DIANN, quantms, FragPipe, or mzIdentML data)

What files do I need?

๐Ÿ” PRIDE Dataset Analysis

Analyze public PRIDE datasets by entering the accession number

View Examples

๐Ÿ” Check Job Status

Enter a job ID to check the status of a previous analysis or view completed results

Job IDs are provided when you start an analysis

โณ Processing...

๐Ÿ“ File Upload

Starting processing...

About pmultiqc

pmultiqc is a MultiQC plugin for comprehensive quality control reporting of proteomics data. It generates interactive HTML reports with visualizations and metrics to help you assess the quality of your mass spectrometry-based proteomics experiments.

๐ŸŒ Project Website ๐Ÿ“‚ GitHub Repository ๐Ÿ“Š Example Reports

Powered by pmultiqc - A comprehensive proteomics quality control framework