PRIDE Archive Help Overview

Please consult the About page if you'd like to see a concise summary of PRIDE. You can ask specific questions over at the FAQ

 


You might want to try the following:

  • Generate mzIdentML files for Complete Submisisons
  • Generate PRIDE XML files for Complete Submisisons
  • Using Aspera for transferring big datasets
  • Check the Train online tutorial
  • If you still have more questions, please visit our FAQ section


You might like to use the following tools amongst others:

  • PRIDE Inspector for visualizing and analysing data as a scientist
  • PX submission Tool to submit data to ProteomeXchange via PRIDE
  • Using the jmzIdentML library for parsing as a developer
  • I want to use the ms-data-core-api, to handle mzIdentML, PRIDE XML, mzTab and/or different mass spectra data formats
  • If you still have more questions, please visit our FAQ section


You might like to ask the following questions amongst others:

  • What kind of terms can be used in basic search?
  • How can search queries be sorted?
  • How can search queries be filtered?
  • How can you browse all PRIDE Archive results?
  • Which data contained in the submitted files are accessible through the web interface and WS?
  • See also our dedicated 'PRIDE dataset tags' page to learn how to use dataset tags.
  • If you still have more questions, please visit our FAQ section