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Label-free Proteomic Analysis of Exosomes Secreted from THP-1-Derived Macrophages in the Absence or Presence of Interferon-α
Species: Homo sapiens (Human)
Project description: Exosomes are extracellular vesicles that function in intercellul (More)
Made public: 2018-12-17
Proteomic analysis of intact flagella of procyclic Trypanosoma brucei cells identifies novel flagellar proteins with unique sub-localisation and dynamics
Species: Trypanosoma brucei
Project description: Identification of intact flagella of procyclic Trypanosoma bruce (More)
Made public: 2018-12-17
ZBTB10 binds the telomeric variant repeat TTGGGG and interacts with TRF2
Species: Homo sapiens (Human)
Project description: Telomeres are the ends of linear chromosomes and together with t (More)
Made public: 2018-12-17
Galectin-8 facilitates B cell responses to surface-tethered antigens by promoting antigen extraction at the B cell synapse
Species: Mus musculus (Mouse)
Project description: Complete activation of B cells relies on their capacity to extra (More)
Made public: 2018-12-14
Identification of Arabidopsis mitochondrial ribosome proteome
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: In order to identify the comprehensive composition of Arabidopsi (More)
Made public: 2018-12-14
Molecular evolution of juvenile hormone esterase-like proteins in a socially exchanged fluid
Species: Camponotus floridanus
Project description: Socially exchanged fluids, such as seminal fluid and milk, are a (More)
Made public: 2018-12-14
Mouse Podocyte Proteome
Species: Mus musculus (Mouse)
Project description: Label-free expression proteomics analysis of FACS-sorted mouse p (More)
Made public: 2018-12-14
Podocyte Focal Adhesion Proteome
Species: Homo sapiens (Human)
Project description: Expression proteomics analysis of focal adhesion complexes isola (More)
Made public: 2018-12-14
PCNA interactome
Species: Homo sapiens (Human)
Project description: We examined the complexity of replication fork composition upon (More)
Made public: 2018-12-14
PDL cellS from human deciduous and permanent teeth LC-MS/MS
Species: Homo sapiens (Human)
Project description: Physiological functions of periodontal ligament (PDL) include an (More)
Made public: 2018-12-14
Physcomitrella patens protonema endogenous peptides
Species: Physcomitrella patens subsp. patens (Moss)
Project description: Peptides are small molecules that play important roles in numero (More)
Made public: 2018-12-14
Screening for insulin-independent pathways that modulate glucose homeostasis identifies androgen receptor antagonists
Species: Danio rerio (Zebrafish) (Brachydanio rerio)
Project description: Pathways modulating glucose homeostasis independently of insulin (More)
Made public: 2018-12-13
Physcomitrella patens secreted endogenous peptides
Species: Physcomitrella patens subsp. patens (Moss)
Project description: We used mass spectrometry to comprehensively analyze the endogen (More)
Made public: 2018-12-13
A Novel Nutrient Deprivation-Induced Neonicotinoid Insecticide Acetamiprid Degradation by Ensifer adhaerens CGMCC 6315
Species: Ensifer adhaerens
Project description: Proteomic Analysis. The proteomic expression of CGMCC 6315 under (More)
Made public: 2018-12-12
Characterization of AAEL012437 (Veneno)-interacting proteins.
Species: Aedes aegypti aegypti
Project description: To investigate the repertoire of proteins interacting with the A (More)
Made public: 2018-12-12
Digging deeper the pyriproxyfen-response of the amphipod Gammarus fossarum with a Q-Exactive HF instrument
Species: Gammarus fossarum
Project description: Proteogenomics of Gammarus fossarum testies for defining protein (More)
Made public: 2018-12-11
Label-free quantitative proteomic approach to investigate the effect of heat stress on Panax ginseng leaves
Species: Panax ginseng
Project description: Ginseng is one of the well-known medicinal plants, exhibiting di (More)
Made public: 2018-12-11
Mouse femur LC-MSMS upon weightlessness
Species: Mus musculus (Mouse)
Project description: Bone loss and immune dysregulation are among the main adverse ou (More)
Made public: 2018-12-11
Dataset 1: SNO-CoA Targets in Mouse Kidney
Species: Mus musculus (Mouse)
Project description: Identification of murine targets of SNO-CoA-mediated S-nitrosyla (More)
Made public: 2018-12-11
Mouse brain protein turnover
Species: Mus musculus (Mouse)
Project description: Brain protein turnover in mouse models of neurodegeneration, and (More)
Made public: 2018-12-11
Effect of purification of galactooligosaccharides derived from lactulose with Saccharomyces cerevisiae on their capacity to bind immune cell receptor Dectin-2
Species: Saccharomyces cerevisiae (Baker's yeast)
Project description: Lactulose-derived oligosaccharides (OsLu) are prebiotic galactoo (More)
Made public: 2018-12-11
Molecular subtypes of malignant peritoneal mesothelioma
Species: Homo sapiens (Human)
Project description: Malignant Peritoneal Mesothelioma (PeM) is a rare but frequently (More)
Made public: 2018-12-11
Comparison of bone demineralization protocols for paleoproteomics applications
Species: Ovis aries (Sheep) Rattus norvegicus (Rat) Mammuthus Muridae Amphibia Bos taurus (Bovine) Mus musculus (Mouse) Balaenidae
Project description: Protocols for bone protein extraction adapted for radiocarbon da (More)
Made public: 2018-12-11
Proteomic landscape of cholangiocarcinomas reveals 3 different subgroups according to their localization and the underlying non-tumor liver
Species: Homo sapiens (Human)
Project description: Cholangiocarcinomas (CC) define a heterogeneous entity based upo (More)
Made public: 2018-12-11
Akt binding proteins
Species: Homo sapiens (Human)
Project description: We try to identify Akt interaction proteins and Akt modification (More)
Made public: 2018-12-11
Dataset 2: Targets of SCoR-mediated Denitrosylation
Species: Homo sapiens (Human)
Project description: Identification of targets of SNO-CoA- and SCoR-mediated denitros (More)
Made public: 2018-12-11
Localization of functionally distinct CDC42 isoforms in neurons requires alternative 3'UTR usage
Species: Mus musculus (Mouse)
Project description: The proper subcellular localization of RNAs and local translatio (More)
Made public: 2018-12-07
proteomic analysis of gamma-tocotienol(GT3)-treated human diploid fibroblasts (HDFs)
Species: Homo sapiens (Human)
Project description: the proteomes of untreated and GT3-treated HDFs were compared (More)
Made public: 2018-12-06
Site-specific K63 ubiquitinomics reveals stabilization of ribosomes in response to oxidative stress
Species: Saccharomyces cerevisiae (Baker's yeast)
Project description: Reprograming of protein synthesis is an essential cellular proce (More)
Made public: 2018-12-06
Native mass spectrometry of calmodulin binding to the plasma-membrane Ca2+-ATPase ACA8
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: Binding of two calmodoulin proteins to the integral membrane pro (More)
Made public: 2018-12-05
Mapping the proteome of the synaptic cleft through peroxidase-based reporter protein SynCAM1-HRP
Species: Rattus norvegicus (Rat)
Project description: Synapses are the brain’s functional units connecting neurons int (More)
Made public: 2018-12-04
A proteomics approach to profiling the temporal translational response to stress and growth
Species: Homo sapiens (Human)
Project description: One major knowledge gap in systems biology is the quantification (More)
Made public: 2018-12-04
Laboratory adaptation of Bacillus anthracis
Species: Bacillus anthracis str. Ames
Project description: The spore forming pathogen Bacillus anthracis is the etiologic a (More)
Made public: 2018-12-04
Geoduck (Panopea generosa) gonad LC-MS/MS
Species: Panopea generosa
Project description: Geoduck clams (Panopea generosa) were collected from Puget Sound (More)
Made public: 2018-12-04
Identification of protein response to infection in Pyropia yezoensis
Species: Pyropia yezoensis
Project description: P. yezoensis is an economically important marine crop and highly (More)
Made public: 2018-12-03
The human allicin-proteome: global protein S-thioallylation of by the garlic defence substance allicin and its biological effects
Species: Homo sapiens (Human)
Project description: A single clove of edible garlic (Allium sativum L.) produces up (More)
Made public: 2018-11-30
Proteogenomics of a Chernobyl's Microbacterium sp. A9 bacterial isolate
Species: Microbacterium sp.
Project description: This project is a proteomic comparison of Microbacterium sp. A9 (More)
Made public: 2018-11-30
Comprehensive Proteome Analyses of Lysine Acetylation in Tea leaves by sensing Nitrogen nutrition
Species: Camellia sinensis
Project description: Acetylation of lysine is a highly dynamic and reversibly regulat (More)
Made public: 2018-11-30
Comparative exoproteome profiling of an invasive and a commensal Staphylococcus haemolyticus isolate
Species: Staphylococcus haemolyticus
Project description: Staphylococcus haemolyticus is a skin commensal emerging as an o (More)
Made public: 2018-11-30
Jellyfish Cyanea capillata nematocyst venoms LC-MSMS
Species: Cyanea capillata
Project description: The scyphozoan jellyfish Cyanea capillata are common blooming s (More)
Made public: 2018-11-30
Jellyfish Nemopilema nomurai nematocyst venom LC-MSMS
Species: Nemopilema nomurai
Project description: The scyphozoan jellyfish Nemopilema nomurai are common blooming (More)
Made public: 2018-11-30
Secretome of trophoblast organoids
Species: Homo sapiens (Human)
Project description: Characterisation of the secretome of placental organoids using L (More)
Made public: 2018-11-29
Calcineurin dependent protein phosphorylation changes during egg activation in Drosophila melanogaster
Species: Drosophila melanogaster (Fruit fly)
Project description: In animals studied to date, the crucial process of egg activatio (More)
Made public: 2018-11-29
Sex Estimation Using Sexually Dimorphic Amelogenin Protein Fragments in Human Enamel
Species: Homo sapiens (Human)
Project description: Sex estimation of human remains from demineralized blocks of too (More)
Made public: 2018-11-29
Grass carp serum IgM LC-ESI-MS/MS and MALDI-MS
Species: Ctenopharyngodon idella
Project description: Glycosylation represents a major post-translational modification (More)
Made public: 2018-11-29
Characterization of legumain degradation of intact proteins
Species: Homo sapiens (Human)
Project description: Legumain or asparagine endopeptidase is a unique cysteine endope (More)
Made public: 2018-11-29
Pitcher fluid protein profiling from Nepenthes spp.
Species: Nepenthes ampullaria Nepenthes rafflesiana Nepenthes x hookeriana
Project description: Pitcher fluids from 3 species of Nepenthes, namely N. ampullaria (More)
Made public: 2018-11-29
Nrf2 sequesters Keap1 preventing podosome disassembly
Species: Homo sapiens (Human)
Project description: Nrf2 is a transcription factor playing an essential role in stre (More)
Made public: 2018-11-28
Rad21-mediated NF-κB signaling limits hematopoietic stem cell self-renewal in aging and inflammation
Species: Mus musculus (Mouse)
Project description: MTD project_description Inflammation and decreased stem cell fun (More)
Made public: 2018-11-28
Deep proteogenomics of Bacillus subtilis provides insights into function and evolution of bacterial organism
Species: Bacillus subtilis subsp. subtilis str. 168
Project description: "Bacillus subtilis is an aerobic, endospore forming, rod-shaped (More)
Made public: 2018-11-28
Comparative characterization of osteoclasts derived from murine bone marrow macrophages and RAW 264.7 cells using quantitative proteomics
Species: Mus musculus (Mouse)
Project description: Osteoclasts (OCs) are bone-resorbing cells differentiated from m (More)
Made public: 2018-11-27
ASSESSING AUTOMATED SAMPLE PREPARATION TECHNOLOGIES FOR HIGH-THROUGHPUT PROTEOMICS OF FROZEN WELL CHARACTERIZED TISSUES FROM SWEDISH BIOBANKS
Species: Homo sapiens (Human) Rattus norvegicus (Rat)
Project description: Large cohorts of carefully collected and stored clinical tissue (More)
Made public: 2018-11-27
zebrafish embryos proteome for slbp2 KO F3 and wild type
Species: Danio rerio (Zebrafish) (Brachydanio rerio)
Project description: zebrafish embryos proteome for slbp2 KO F3 and wild type at 2.5h (More)
Made public: 2018-11-27
Label free proteomics of isolated lysosomes from a wild type and LIMP2 knock out mouse
Species: Mus musculus (Mouse)
Project description: Quantitative label free proteomics on an n=1 experiment of isola (More)
Made public: 2018-11-27
The effect of proteasome inhibition on the HLA peptidome
Species: Homo sapiens (Human)
Project description: The Major histocompatibility complex (MHC) class I peptidome is (More)
Made public: 2018-11-27
Receptor-mediated recruitment of cytosolic J-proteins to the mitochondrial outer membrane promotes assembly of preprotein translocases
Species: Saccharomyces cerevisiae (Baker's yeast)
Project description: Mitochondria possess elaborate machineries for the import of pre (More)
Made public: 2018-11-26
Chemical Proteomics Partners identification of Cycloamphilectene
Species: Homo sapiens (Human)
Project description: The identification of the cycloamphilectene cellular interactome (More)
Made public: 2018-11-26
Comparative proteomics using iodoTMT to identify changes in protein expression and cysteine oxidation in Leishmania mexicana
Species: Leishmania mexicana MHOM/GT/2001/U1103
Project description: Two cell-lines of Leishmania mexicana were investigated using a (More)
Made public: 2018-11-23
Streptococcus agalactiae temperature changes
Species: Streptococcus agalactiae
Project description: Streptococcus agalactiae (Lancefield’s group B Streptococcus, GB (More)
Made public: 2018-11-23
Composition of the cerebrospinal fluid of normal and Mpdz-linked hydrocephalus-harboring mice
Species: Mus musculus (Mouse)
Project description: Though congenital hydrocephalus is heritable, it has been linked (More)
Made public: 2018-11-23
Proteomics at large: Discovery and replication of plasma proteomic biomarkers in independent cohorts - Overweight and obese patients of the Weight Management Clinical program of The Ottawa Hospital
Species: Homo sapiens (Human)
Project description: Holistic human proteome maps are expected to complement comprehe (More)
Made public: 2018-11-23
Resuscitation from the viable but nonculturable state of Escherichia coli: the importance of a pyruvate sensing network
Species: Escherichia coli
Project description: Viable but nonculturable (VBNC) organisms have been underestimat (More)
Made public: 2018-11-23
Bi-directional cell-pericellular matrix interactions direct stem cell fate
Species: Homo sapiens (Human)
Project description: Modifiable hydrogels have revealed tremendous insight into how p (More)
Made public: 2018-11-23
Quantitative ER chemical proteomics with ER-localizable reactive molecules under ER-stress condition
Species: Homo sapiens (Human)
Project description: The endoplasmic reticulum (ER) is an organelle that performs a v (More)
Made public: 2018-11-22
Proteome, acetylome and succinylome analysis of pCAR1-free and pCAR1-harbouring Pseudomonas putida KT2440 (2)
Species: Pseudomonas putida KT2440
Project description: The impact of the conjugative plasmid pCAR1, which is involved i (More)
Made public: 2018-11-22
ChIP-MS for GR in liver from wild type and E47 mutant mice
Species: Mus musculus (Mouse)
Project description: Glucocorticoids (GCs) are widely prescribed effective drugs, but (More)
Made public: 2018-11-22
Systematic analysis of the lysine acetylome reveals diverse functions of lysine acetylation in the oleaginous yeast Yarrowia lipolytica
Species: Yarrowia lipolytica (Candida lipolytica)
Project description: Lysine acetylation of proteins, a major post-translational modif (More)
Made public: 2018-11-22
DeltaFBA shotgun Francicella
Species: Escherichia coli
Project description: Fructose-1,6-bisphosphate aldolase, a ubiquitous metabolic enzym (More)
Made public: 2018-11-22
Escherichia coli msbB-deficient mutant extracellular vesicle proteome
Species: Escherichia coli
Project description: Bacteria actively secrete extracellular vesicles (EVs), spherica (More)
Made public: 2018-11-22
Staphylococcus aureus RN4220 wild-type extracellular vesicle proteome
Species: Staphylococcus aureus
Project description: Bacteria actively secrete extracellular vesicles (EVs), spherica (More)
Made public: 2018-11-22
Analysis of the temperature-dependent virulence of Pseudomonas plecoglossicida with iTRAQ
Species: Pseudomonas plecoglossicida NB2011
Project description: Pseudomonas plecoglossicida is a facultative pathogen that is as (More)
Made public: 2018-11-22
Proteomic characterisation of bovine and avian purified protein derivatives and identification of specific antigens for serodiagnosis of bovine tuberculosis
Species: Mycobacterium avium subsp. avium ATCC 25291 Mycobacterium bovis AN5
Project description: Bovine purified protein derivative (bPPD) and avian purified pro (More)
Made public: 2018-11-22
Immunoproteomic analysis of the excretory-secretory products of the Trichinella pseudospiralis adult worms and newborn larvae
Species: Trichinella pseudospiralis
Project description: In this study, we used Two-dimensional gel electrophoresis (2-DE (More)
Made public: 2018-11-22
Proteomic SIP of the soil communities
Species: uncultured soil bacterium S0137
Project description: characterization of soil communities amended with 13C-methanol u (More)
Made public: 2018-11-21
Multi-omics of the initial soil communites
Species: uncultured soil bacterium S0164
Project description: characterization of soil communities with metagenomics and metap (More)
Made public: 2018-11-21
Multi-omics of the rhizosphere communities of Arabidopsis
Species: uncultured soil bacterium S0137
Project description: characterization of rhizosphere communities of arabidopsis with (More)
Made public: 2018-11-21
Mass spectrometry of Phage PhiKZ gp54 with the prohead protease gp175
Species: Pseudomonas phage phiKZ
Project description: Assay of recombinant Pseudomonas phage PhiKZ gp54 with the prohe (More)
Made public: 2018-11-21
Proteomic analyses of Pseudomonas infected with giant phage PhiKZ
Species: Pseudomonas phage phiKZ
Project description: Preliminary analyses of Pseudomonas aeruginosa cells infected wi (More)
Made public: 2018-11-21
Application of SPOT to Zn-treated HL-60 cells for multi-omics mechanism discovery
Species: Homo sapiens (Human)
Project description: Application of SPOT to Zn-treated HL-60 cells for multi-omics me (More)
Made public: 2018-11-21
Proteomics analysis of ALK signaling in neuroblastoma cells
Species: Homo sapiens (Human)
Project description: We used mass spectrometry-based proteomics to unravel anaplastic (More)
Made public: 2018-11-21
Identification of the Saccharomyces cerevisiae ZMP binders
Species: Saccharomyces cerevisiae (Baker's yeast)
Project description: 5′-phosphoribosyl-5-amino-4-imidazole carboxamide monophosphate (More)
Made public: 2018-11-21
Translation of non-standard codon nucleotides reveals minimal requirements for codon-anticodon interactions
Species: Homo sapiens (Human)
Project description: The precise interplay between the mRNA codon and the tRNA antico (More)
Made public: 2018-11-21
Translation of non-standard codon nucleotides reveals minimal requirements for codon-anticodon interactions
Species: Escherichia coli
Project description: The precise interplay between the mRNA codon and the tRNA antico (More)
Made public: 2018-11-21
Identification and functional annotation of the Src-regulated kinome, part 2
Species: Homo sapiens (Human)
Project description: Despite significant progress, our understanding of how specific (More)
Made public: 2018-11-21
First evidence that a protein coded by a short ORF, not by the annotated CDS is the main gene product
Species: Homo sapiens (Human)
Project description: Proteogenomics and ribosome profiling concurrently show that gen (More)
Made public: 2018-11-21
SWATH-MS proteomic analysis of nitrogen deficiency response of Arabidopsis
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: Protein profiling of Arabidopsis thaliana seedling under nitroge (More)
Made public: 2018-11-21
Loqs2 (AAEL013721) interactome in Aedes aegypti Aag2 cells (FLAG-tag)
Species: Aedes aegypti (Yellowfever mosquito) (Culex aegypti)
Project description: Loquacious-2 (Loqs2) is a recently identified paralog of Loquaci (More)
Made public: 2018-11-21
Ribosomal/nucleolar stress induction regulates tert-butyl hydroperoxide (tBHP) mediated oxidative stress in Anopheles gambiae midguts
Species: Anopheles gambiae (African malaria mosquito)
Project description: A general understanding of redox homeostasis in An. gambiae midg (More)
Made public: 2018-11-21
Integrative proteomics reveals a protective role of PRC2 for the ground state pluripotent epigenome
Species: Mus musculus (Mouse)
Project description: The ground state of pluripotency is defined as a basal prolifera (More)
Made public: 2018-11-21
SILAC analysis of Δhmt1 yeast
Species: Saccharomyces cerevisiae (Baker's yeast)
Project description: In this study, the proteome-level effects of the deletion of the (More)
Made public: 2018-11-21
Quantitative analysis of the exoproteome from a Staphylococcus aureus LAC sarA mutant
Species: Staphylococcus aureus
Project description: The staphylococcal accessory regulator A (sarA) impacts the extr (More)
Made public: 2018-11-21
ER chemical proteomics with ER-localizable reactive molecules
Species: Homo sapiens (Human)
Project description: The endoplasmic reticulum (ER) is an organelle that performs a v (More)
Made public: 2018-11-21
Hepatic mitochondrial proteome dynamics in NAFLD mice
Species: Mus musculus (Mouse)
Project description: Nonalcoholic fatty liver disease (NAFLD) is associated with hepa (More)
Made public: 2018-11-21
In search of Varroa chemosensory related proteins using transcriptomic and proteomic tools
Species: Varroa destructor
Project description: The tight synchronization between the life cycle of the obligato (More)
Made public: 2018-11-21
Genetic analysis of Hsp70 phosphorylation sitesreveals a role in Candida albicanscell and colony morphogenesis
Species: Candida albicans (Yeast)
Project description: Heat shock proteins are best known for their role as chaperonins (More)
Made public: 2018-11-21
Chemical cross-linking enables drafting ClpXP proximity maps and taking snapshots of in vivo interaction networks
Species: Homo sapiens (Human) Escherichia coli Staphylococcus aureus
Project description: Protein-protein interactions within complexes and networks are o (More)
Made public: 2018-11-21
Succinylome analysis of pCAR1-free and pCAR1-harbouring Pseudomonas putida KT2440 (2).
Species: Pseudomonas putida KT2440
Project description: The impact of the conjugative plasmid pCAR1, which is involved i (More)
Made public: 2018-11-21
Pig novel protein from multiple tissues
Species: Sus scrofa domesticus (domestic pig)
Project description: We identified 24,431 protein isoforms encoded by 19,914 genes ac (More)
Made public: 2018-11-21
The thermodynamic stability of the human proteome
Species: Homo sapiens (Human)
Project description: Most natural proteins fold into a native conformation stabilized (More)
Made public: 2018-11-21
Ablation of mitochondrial rhomboid Parl causes Leigh syndrome
Species: Mus musculus (Mouse)
Project description: The mitochondrial intramembrane rhomboid protease Parl plays ess (More)
Made public: 2018-11-21

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