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SseF-SscB Interaction
Species: Salmonella enterica subsp. enterica serovar Typhimurium
Project description: Bacterial type III secretion systems are able to secrete membran (More)
Made public: 2018-10-16
Co-IP (AP-MS) of Connexin-43
Species: Homo sapiens (Human)
Project description: Co-IP Experiment Bait: Cx43-Flag Cell line: Hela Related Publica (More)
Made public: 2018-10-16
HDX-MS on secondary transporters
Species: Escherichia coli
Project description: Secondary transporters undergo structural rearrangements to cata (More)
Made public: 2018-10-16
Extraction of Entamoeba histolytica membrane proteins using three extraction methods
Species: Entamoeba histolytica HM-1:IMSS
Project description: Entamoeba histolytica membrane proteins are important players in (More)
Made public: 2018-10-16
GlycoProteomics in CDG (congenital disorder of glycosilation)
Species: Mus musculus (Mouse)
Project description: Critical role for high multiplicity of protein N-linked glycans (More)
Made public: 2018-10-16
Defining the cellular proteolytic landscape
Species: Homo sapiens (Human)
Project description: Mass spectrometry analysis of cellular targets of protein degrad (More)
Made public: 2018-10-15
The activity-dependent bulk endocytosis proteome reveals a key presynaptic role for Rab11
Species: Rattus norvegicus (Rat)
Project description: Activity-dependent bulk endocytosis (ADBE) is the dominant mode (More)
Made public: 2018-10-15
Tissue-based mapping of the fathead minnow (Pimephales promelas) transcriptome and proteome
Species: Pimephales promelas
Project description: Omics approaches are broadly used to explore endocrine and toxic (More)
Made public: 2018-10-15
Mouse_T1D_microbiota
Species: gut metagenome Mus musculus (Mouse)
Project description: A metaproteomic approach was exploited to investigate microbiota (More)
Made public: 2018-10-15
Kinases orchestrate phospho-proteome dynamics during mitotic exit
Species: Saccharomyces cerevisiae (Baker's yeast)
Project description: The cell division cycle culminates in mitosis when two daughter (More)
Made public: 2018-10-15
MitoTAILS: N-terminomics profiling of mitochondrial proteolysis
Species: Homo sapiens (Human)
Project description: Mitochandria were isolated from SILAC labeled HeLa cells, either (More)
Made public: 2018-10-15
Mammalian proteome changes during oxidative stress and stress of the endoplasmic reticulum
Species: Homo sapiens (Human)
Project description: Stress due to protein misfolding in the endoplasmic reticulum af (More)
Made public: 2018-10-11
Defining the cellular proteolytic landscape with different controls
Species: Homo sapiens (Human)
Project description: Mass spectrometry analysis of cellular targets of protein degrad (More)
Made public: 2018-10-11
Defining the cellular proteolytic landscape
Species: Homo sapiens (Human)
Project description: Mass spectrometry analysis of cellular targets of protein degrad (More)
Made public: 2018-10-11
NuRD-interacting protein ZFP296 regulates genome-wide NuRD localization and differentiation of mouse embryonic stem cells
Species: Mus musculus (Mouse)
Project description: The Nucleosome Remodeling and Deacetylase (NuRD) complex plays a (More)
Made public: 2018-10-11
Defining the cellular proteolytic landscape cross time points
Species: Homo sapiens (Human)
Project description: Mass spectrometry analysis of cellular targets of protein degrad (More)
Made public: 2018-10-11
Quantitative phosphoproteomic analysis reveals common regulatory mechanisms of immune components during effector- and PAMP-triggered immunity
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: The dataset for this project was to identify significantly regul (More)
Made public: 2018-10-11
Mutant calreticulin binders analysis
Species: Homo sapiens (Human) Mus musculus (Mouse)
Project description: Mutant, truncated and wild-type human calreticul was co-purified (More)
Made public: 2018-10-11
ProteomeGenerator analysis of K052
Species: Homo sapiens (Human)
Project description: To improve identification of canonical and non-canonical protein (More)
Made public: 2018-10-11
Mechanisms preserving insulin action during high dietary fat intake in healthy men
Species: Homo sapiens (Human) Mus musculus (Mouse)
Project description: Prolonged intervention studies investigating molecular metabolis (More)
Made public: 2018-10-11
Defining the cellular proteolytic landscape cross time points, part 2
Species: Homo sapiens (Human)
Project description: Mass spectrometry analysis of cellular targets of protein degrad (More)
Made public: 2018-10-11
Human protein phosphorylation analysis
Species: Homo sapiens (Human)
Project description: Mycobacterium tuberculosis (Mtb) protein kinase G (PknG) is a cr (More)
Made public: 2018-10-10
Loss of the Mia40a oxidoreductase leads to hepato-pancreatic insufficiency in the zebrafish
Species: Danio rerio (Zebrafish) (Brachydanio rerio)
Project description: Development and function of tissues and organs are powered by th (More)
Made public: 2018-10-10
TDP-43 in ALS/FTLD studied by a novel aggregate extraction method
Species: Homo sapiens (Human)
Project description: Accumulation of abnormally phosphorylated TDP-43 (pTDP-43) is th (More)
Made public: 2018-10-10
Proteogenomic analysis of Mycobacterium tuberculosis Beijing B0/W148 cluster strains
Species: Mycobacterium tuberculosis
Project description: Nowadays proteomics is the one of the major instruments for edit (More)
Made public: 2018-10-08
INTEGRATED MULTI-OMICS ANALYSES OF MAIZE REVEAL ROLES FOR AUTOPHAGIC RECYCLING IN PROTEOME REMODELING AND LIPID TURNOVER
Species: Zea mays (Maize)
Project description: The turnover of cytoplasmic material via autophagic encapsulatio (More)
Made public: 2018-10-08
Physiological and proteomic changes in soft wheat seeds during accelerated aging
Species: Triticum aestivum (Wheat)
Project description: Wheat (Triticum aestivum L.), one of the most important crops in (More)
Made public: 2018-10-08
Caloric restriction and rat fecal microbiota
Species: rat gut metagenome
Project description: Characterization of the fecal metaproteome in rats fed ad libitu (More)
Made public: 2018-10-08
Crosslinking Mapping of yeast Komagataella phaffii TFIID complex
Species: Komagataella phaffii
Project description: Transcription preinitiation complex assembly on the promoters of (More)
Made public: 2018-10-08
TAILS N-Terminomics and Proteomics Show Complex Regulation of Proteolytic Processing by O-glycosylation
Species: Homo sapiens (Human)
Project description: Proteolytic processing is an irreversible post-translational mod (More)
Made public: 2018-10-08
Fish Liver Immune Response LC-MSMS
Species: Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)
Project description: High-throughput proteomics was used to determine the role of the (More)
Made public: 2018-10-08
FAM183b interactome
Species: Homo sapiens (Human) Mus musculus (Mouse)
Project description: A SF-TAP tagged FAM183b fusion protein was expressed in HEK293T (More)
Made public: 2018-10-08
Human Urinary Proteome in Vesicoureteral Reflux
Species: Homo sapiens (Human)
Project description: Vesicoureteral reflux (VUR) is a common pediatric condition that (More)
Made public: 2018-10-05
Spliceosome specifically associates with CTD phospho-serine 5 isoform of RNA polymerase II to promote co-transcriptional splicing
Species: Homo sapiens (Human)
Project description: Co-transcriptional splicing of introns is a defining feature of (More)
Made public: 2018-10-05
Plasmodium falciparum PfPK7-Dependent Phosphoproteome
Species: Plasmodium falciparum Homo sapiens (Human)
Project description: In this project we use MS2-based 6-plex TMT quantitation to comp (More)
Made public: 2018-10-04
Human testis off-line LC-MS/MS
Species: Homo sapiens (Human)
Project description: In order to identify more MPs and get deeper proteomic data of t (More)
Made public: 2018-10-04
Hypolipidemic effects of Tamarindus indica fruit pulp extract
Species: Mesocricetus auratus (Golden hamster)
Project description: In this study, the hypolipidemic effects of Tamarindus indica fr (More)
Made public: 2018-10-04
Proteomic and phosphoproteomic analysis of PKCe KO
Species: Mus musculus (Mouse)
Project description: Activation of protein kinase C epsilon (PKCε) in the liver has b (More)
Made public: 2018-10-04
Time-resolved proteomics of Adenovirus infected cells
Species: Human adenovirus C serotype 2 (HAdV-2) (Human adenovirus 2) Homo sapiens (Human)
Project description: To combat virus infections, which are major human killers, a dee (More)
Made public: 2018-10-04
D. magna CT448 protease specificity
Species: Daphnia magna
Project description: Mass developments of toxin-producing cyanobacteria are frequentl (More)
Made public: 2018-10-04
PSI supercomplex copurification using PSI His-tag
Species: Chlamydomonas reinhardtii
Project description: Chlamydomonas reinhardtii PSI-Cyt b6f complexes from sucrose den (More)
Made public: 2018-10-03
Cell rearrangement during angiogenesis requires suppression of actomyosin at cell-cell contacts via PI3-kinase.
Species: Mus musculus (Mouse)
Project description: Sprouting angiogenesis is a highly dynamic process which relies (More)
Made public: 2018-10-02
CDKL5 substrates
Species: Homo sapiens (Human)
Project description: Identification of CDKL5 substrates. Immuno-precipitated proteins (More)
Made public: 2018-10-02
Tetrahydrobiopterin modulates ubiquitin conjugation to UBC13/UBE2N and proteasome activity by S-nitrosation
Species: Mus musculus (Mouse)
Project description: Nitric Oxide (NO) is an intracellular signalling mediator, which (More)
Made public: 2018-10-02
S-nitrosylation in Shank3 mutated mice
Species: Mus musculus (Mouse)
Project description: We tested the hypothesis that a mutated gene associated with hum (More)
Made public: 2018-10-02
Proteomic profiling of the proteolytic events in the secretome of the transformed phenotype of melanocyte-derived cells using Terminal Amine Isotopic Labeling of Substrates
Species: Mus musculus (Mouse)
Project description: The comprehensive profiling of the repertoire of secreted protei (More)
Made public: 2018-10-02
A mitochondrial proteome profile of type 2 diabetes mellitus in skeletal muscles
Species: Homo sapiens (Human)
Project description: The goal of the project is to understand the mitochondrial prote (More)
Made public: 2018-10-02
Nut interactome in round/elongating spermatids
Species: Mus musculus (Mouse)
Project description: NUT, nuclear protein in testis is the universal fusion partner o (More)
Made public: 2018-10-02
Thylakoid membrane proteome remodelling in response to variation in plant growth irradiance
Species: Pisum sativum (Garden pea)
Project description: Plant thylakoid membranes contain hundreds of proteins closely i (More)
Made public: 2018-10-02
Methanobacterium thermautotrophicus temperature-stress LC-MSMS
Species: Methanobacterium
Project description: Methanothermobacter thermautotrophicus is a model thermophilic h (More)
Made public: 2018-10-02
The proteome of pig spermatozoa is remodelled during ejaculation
Species: Sus scrofa domesticus (domestic pig)
Project description: Proteins are essential for sperm function, including fertilizing (More)
Made public: 2018-10-02
TMT10-TAILS for monitoring MALT1 substrate cleavage
Species: Homo sapiens (Human)
Project description: We used TMT-TAILS to monitor MALT1 substrate cleavage in normal (More)
Made public: 2018-10-02
Proteomes of dissected developing barley endosperm layers and microscopy identifies the starchy endosperm as prominent tissue for the storage of ER derived hordeins accompanied by the accumulation of HvPDIL1-1 and its intracellular re-localization
Species: Hordeum vulgare (Barley)
Project description: Barley (Hordeum vulgare) is one of the major food sources for hu (More)
Made public: 2018-10-01
A compendium of co-regulated protein complexes in breast cancer reveals collateral loss events
Species: Homo sapiens (Human)
Project description: Protein complexes are responsible for the bulk of activities wit (More)
Made public: 2018-10-01
AP-4 vesicles contribute to spatial control of autophagy via RUSC-dependent peripheral delivery of ATG9A
Species: Homo sapiens (Human)
Project description: Adaptor protein 4 (AP-4) is an ancient membrane trafficking comp (More)
Made public: 2018-09-27
Integrated systems analysis reveals conserved gene networks underlying response to spinal cord injury
Species: Rattus norvegicus (Rat)
Project description: Spinal cord injury (SCI) is a devastating neurological condition (More)
Made public: 2018-09-25
Analysis of the TNFR1-SC from HOIP-proficient and -deficient A549 cells
Species: Homo sapiens (Human)
Project description: This study aimed at determining which components of the TNFR1-SC (More)
Made public: 2018-09-25
Analysis of RIPK1 phosphorylation in vitro
Species: Homo sapiens (Human)
Project description: This study aims at determining which RIPK1 residues are phosphor (More)
Made public: 2018-09-25
ELF3-AP MS at ZT4 in wt, phyb and phya mutant backgrounds
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: Molecular basis of flowering under natural long-day conditions i (More)
Made public: 2018-09-25
Oryza sativa AM fungi interaction
Species: Oryza sativa subsp. japonica (Rice)
Project description: We describe a method that detects membrane proteins from cell ty (More)
Made public: 2018-09-24
Zea mays AM fungi interaction
Species: Zea mays (Maize)
Project description: We describe a method that detects membrane proteins from cell ty (More)
Made public: 2018-09-24
Two faces of an essential PknB substrate in mycobacteria
Species: Mycobacterium tuberculosis H37Rv
Project description: Tuberculosis claims nearly 2 million lives annually and its caus (More)
Made public: 2018-09-24
A549 CD38 proteomic analysis, part 2
Species: Homo sapiens (Human)
Project description: A549 CD38 proteomic analysis, three biological replicate, the se (More)
Made public: 2018-09-24
A549 CD38 proteomic analysis, part 1
Species: Homo sapiens (Human)
Project description: A549 CD38 proteomic analysis, three biological replicate, the fi (More)
Made public: 2018-09-24
Salmon fast growing muscle LC-MSMS
Species: Oncorhynchus kisutch
Project description: Fast growth is vital to the commercial production of fish and ha (More)
Made public: 2018-09-24
Plant UDP-N-acetylglucosamine (UDP-GlcNAc) transporter (UGNT1) glycopeptide analysis
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: Glycosylation reactions require activated glycosyl donors in for (More)
Made public: 2018-09-24
Short enzymatic reactions in proteomics studies
Species: Homo sapiens (Human)
Project description: SKBR3 breast cancer cell extracts were digested with trypsin (or (More)
Made public: 2018-09-24
Quantitative phosphoproteomic for CDKL5 substrates
Species: Homo sapiens (Human)
Project description: Global phosphoproteomic screen to identify the first cellular su (More)
Made public: 2018-09-24
Proteome, acetylome and succinylome analysis of pCAR1-free and pCAR1-harbouring Pseudomonas putida KT2440
Species: Pseudomonas putida KT2440
Project description: The impact of the conjugative plasmid pCAR1, which is involved i (More)
Made public: 2018-09-24
Proteomics of human cord blood reticulocyte-derived exosomes
Species: Homo sapiens (Human)
Project description: Human reticulocytes were enriched from human umbilical blood, an (More)
Made public: 2018-09-24
Acetylation in Borrelia burgdorferi
Species: Borrelia burgdorferi B31
Project description: Borelia burgdorferi, the causative agent of the Lyme disease, cy (More)
Made public: 2018-09-24
Shotgun proteomics analysis of saliva and salivary gland tissue from the common octopus Octopus vulgaris
Species: Octopus vulgaris
Project description: The saliva of the common octopus (Octopus vulgaris) has been the (More)
Made public: 2018-09-24
glyXtoolMS Example Data Sets
Species: Homo sapiens (Human)
Project description: The data sets of human IgG and human fibrinogen are used as test (More)
Made public: 2018-09-24
Identification of non-overlapping functions between adaptor proteins NCK1 and NCK2
Species: Homo sapiens (Human)
Project description: Signals from cell surface receptors are often relayed via adapto (More)
Made public: 2018-09-20
A survival mechanism controlled by cadherins and Dlg1 polarity complex inhibits Fas cell death receptor signaling
Species: Homo sapiens (Human)
Project description: A fine regulation of epithelia cell death is required to maintai (More)
Made public: 2018-09-20
Protein nitrosylation under flooding
Species: Glycine max (Soybean) (Glycine hispida)
Project description: To understand soybean responses to flooding stress, nitrosylated (More)
Made public: 2018-09-19
SUMO targets the APC/C in a phosphorylation-dependent manner to regulate transition from metaphase to anaphase
Species: Homo sapiens (Human)
Project description: Signal transduction by Small Ubiquitin-like Modifier (SUMO) regu (More)
Made public: 2018-09-19
Online Weak Cation Exchange-HILIC × Reversed Phase LC UVPD-HRMS of intact HeLa Histones
Species: Homo sapiens (Human)
Project description: Intact HeLa core Histones were analyzed using an online two-dime (More)
Made public: 2018-09-19
TCellXTalk enables the detection of co-modified peptides for the study of protein post-translational modification cross-talk in T cells
Species: Homo sapiens (Human)
Project description: Protein function is regulated by post-translational modification (More)
Made public: 2018-09-19
The host cell proteome of Physcomitrella patens
Species: Physcomitrella patens subsp. patens (Moss)
Project description: Host cell proteins are inevitable contaminants of biopharmaceuti (More)
Made public: 2018-09-19
Identification of potential biomarkers of head and neck squamous cell carcinoma using iTRAQ based quantitative proteomic approach
Species: Homo sapiens (Human)
Project description: Head and neck squamous cell carcinoma (HNSCC) is one of the most (More)
Made public: 2018-09-19
Organisms with alternative genetic codes resolve unassigned codons via mistranslation and ribosomal rescue
Species: Escherichia coli
Project description: Organisms possessing genetic codes with unassigned codons raise (More)
Made public: 2018-09-18
Arabidopsis SNAREs SYP121 and SYP122 mediate the secretion of distinct cargo 2 subsets
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: SNARE (soluble N-ethylmaleimide-sensitive factor attachment prot (More)
Made public: 2018-09-18
Genomes of trombidid mites reveal novel predicted allergens and laterally-transferred genes associated with secondary metabolism
Species: Dinothrombium Leptotrombidium deliense
Project description: Background Trombidid mites have a unique lifecycle in which only (More)
Made public: 2018-09-18
Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data
Species: Homo sapiens (Human)
Project description: A quantitative time series of EGFR signaling was acquired using (More)
Made public: 2018-09-18
Absolute proteome quantification of highly purified reticulocytes and erythrocytes
Species: Homo sapiens (Human)
Project description: Erythrocytes are the most numerous cells of the human body (Send (More)
Made public: 2018-09-18
Interaction of the GEF SH3BP5 and its cognate GTPase Rab11
Species: Homo sapiens (Human)
Project description: H/D exchange analysis of the GEF SH3BP5 and its interaction with (More)
Made public: 2018-09-18
Identification of hypoxia-induced proteins using SILAC-based proteomics
Species: Homo sapiens (Human)
Project description: A hallmark of solid tumours is the development of hypoxic region (More)
Made public: 2018-09-18
Quantitative analysis of the erythrocyte kinome
Species: Homo sapiens (Human)
Project description: The erythrocytes, the most numerous cells of the human body (Sen (More)
Made public: 2018-09-18
ISF Rat Characterization
Species: Rattus norvegicus (Rat)
Project description: Rat ISF Characterization- Quantitative assessment of Rat ISF to (More)
Made public: 2018-09-18
Chemical genetic identification of CDKL5 substrates reveals its role in neuronal microtubule dynamics
Species: Mus musculus (Mouse)
Project description: Loss-of-function mutations in CDKL5 kinase causes severe neurode (More)
Made public: 2018-09-18
High persister protein kinase HipA and its gain-of-function variant HipA7 phosphorylate different substrate pools in Escherichia coli
Species: Escherichia coli
Project description: Bacterial persistence, the ability to survive antibiotic treatme (More)
Made public: 2018-09-17
Characterization of cerebrospinal fluid via data-independent acquisition mass spectrometry
Species: Homo sapiens (Human)
Project description: Cerebrospinal fluid (CSF) is in direct contact with the brain an (More)
Made public: 2018-09-17
Characterization of cerebrospinal fluid via data-independent acquisition mass spectrometry
Species: Homo sapiens (Human)
Project description: Cerebrospinal fluid (CSF) is in direct contact with the brain an (More)
Made public: 2018-09-17
Characterization of cerebrospinal fluid via data-independent acquisition mass spectrometry
Species: Homo sapiens (Human)
Project description: Cerebrospinal fluid (CSF) is in direct contact with the brain an (More)
Made public: 2018-09-17
Characterization of cerebrospinal fluid via data-independent acquisition mass spectrometry
Species: Homo sapiens (Human)
Project description: Cerebrospinal fluid (CSF) is in direct contact with the brain an (More)
Made public: 2018-09-17
Characterization of cerebrospinal fluid via data-independent acquisition mass spectrometry
Species: Homo sapiens (Human)
Project description: Cerebrospinal fluid (CSF) is in direct contact with the brain an (More)
Made public: 2018-09-17
Diverged Trypanosome MICOS as a Hub for Mitochondrial Cristae Shaping and Protein Import
Species: Trypanosoma brucei
Project description: The mitochondrial contact site and cristae organization system ( (More)
Made public: 2018-09-13
High Density Lipoprotein Proteome in Non-alcoholic Fatty Liver Disease Patients
Species: Homo sapiens (Human)
Project description: Characterization of HDL proteome in patients diagnosed with non- (More)
Made public: 2018-09-13
Proteome analysis of Escherichia coli ptsN-null strain under different nitrogen regimes
Species: Escherichia coli
Project description: The carbohydrate-uptake phosphorelay PTS system plays a key role (More)
Made public: 2018-09-13

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