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Genetic profiling and surface proteome analysis of epicardial derived cells reveals cardiogenic potential
Species: Homo sapiens (Human) Rattus norvegicus (Rat)
Project description: Rationale: Epicardium-derived cells (EPDC) are formed in respons (More)
Made public: 2018-10-19
Cdk1 Gates Cell Cycle-Dependent tRNA Synthesis by Regulating RNA Polymerase III Activity
Species: Saccharomyces cerevisiae (Baker's yeast)
Project description: tRNA genes are transcribed by RNA polymerase III (RNAPIII). Duri (More)
Made public: 2018-10-19
A Parts List for Fungal Cellulosomes Revealed by Comparative Genomics
Species: Piromyces sp. Anaeromyces Neocallimastix sp. G-1
Project description: Characterization of proteins critical to fungal cellulosome asse (More)
Made public: 2018-10-19
Differential proteomics of Desulfurella amilsii to explore sulfur reductive metabolism
Species: Desulfurella amilsii
Project description: Desulfurella amilsii is an acidotolerant sulfur-reducing bacteri (More)
Made public: 2018-10-19
Chlamydomonas reinhardtii flagella cc125 ift139-2 dhc1b-3
Species: Chlamydomonas reinhardtii
Project description: As part of a cryo EM study of IFT trains in Chlamydomonas flagel (More)
Made public: 2018-10-19
p65-HaloTag copurifying proteins in human 293T cells
Species: Homo sapiens (Human)
Project description: In effort to develop methodology for targeted top down mass spec (More)
Made public: 2018-10-19
Vinculin-network mediated cytoskeletal remodeling regulates contractile function in the aging heart - Monkey data
Species: Macaca mulatta (Rhesus macaque)
Project description: The human heart is capable of functioning for decades despite mi (More)
Made public: 2018-10-19
BRAF inhibitor resistance in melanoma cell lines
Species: Homo sapiens (Human)
Project description: LC-MS/MS analysis of cell lines with induced resistance to BRAF (More)
Made public: 2018-10-19
Pathogen or enemy release in invasive wasps?
Species: Vespula vulgaris (Yellow jacket) (Wasp)
Project description: No evidence of enemy release in pathogen and microbial communiti (More)
Made public: 2018-10-19
T. pseudoethanolicus response to furfural stress - LC-MS/MS
Species: Thermoanaerobacter pseudethanolicus
Project description: Identification of the furfural detoxifying machinery in T. pseud (More)
Made public: 2018-10-19
Susceptible interaction Ectocarpus/Eurychasma
Species: Ectocarpus siliculosus (Brown alga)
Project description: The pathosystem between the model brown alga Ectocarpus siliculs (More)
Made public: 2018-10-19
Sepsis related glycopeptides
Species: Homo sapiens (Human)
Project description: The plasma of the sepsis patient survivors and non-survivors (n= (More)
Made public: 2018-10-19
Proteomic Evidence of Ancient Mongolian Dietary Dairy Sources in Ancient Dental Calculus
Species: Homo sapiens (Human)
Project description: To investigate dairy consumption in ancient Mongolia, we analyse (More)
Made public: 2018-10-19
Affinity capture of S. cerevisiae protein after glutaraldehyde stabilization
Species: Saccharomyces cerevisiae (Baker's yeast)
Project description: It remains extraordinarily challenging to elucidate endogenous p (More)
Made public: 2018-10-19
CLPC1 maintains chloroplast proteome and RNA homeostasis
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: In chloroplasts, homeostasis of the proteome maintained by prote (More)
Made public: 2018-10-19
Medial globus pallidus proteome
Species: Homo sapiens (Human)
Project description: In order to analyse the globus pallidus proteome in a large-scal (More)
Made public: 2018-10-19
Lateral globus pallidus proteome
Species: Homo sapiens (Human)
Project description: In order to analyse the globus pallidus proteome in a large-scal (More)
Made public: 2018-10-19
putamen proteme
Species: Homo sapiens (Human)
Project description: In order to analyse the putamen proteome in a large-scale format (More)
Made public: 2018-10-19
The plasma membrane, casein-containing vesicles and endoplasmic reticulum are the main membrane contributors to milk fat globule membrane formation
Species: Mus musculus (Mouse)
Project description: During lactation, mammary epithelial secretory cells secrete hug (More)
Made public: 2018-10-19
Caudate nucleus proteome
Species: Homo sapiens (Human)
Project description: In order to analyse thecaudate nucleus proteome in a large-scale (More)
Made public: 2018-10-19
Integrative Genomics Positions MKRN1 as a Novel Ribonucleoprotein within the Embryonic Stem Cell Gene Regulatory Network
Species: Mus musculus (Mouse)
Project description: In this study we affinity purified FLAG-tagged MKRN1 from mouse (More)
Made public: 2018-10-19
Human Sumoylome (SUMO-2) upon bacterial infection
Species: Homo sapiens (Human)
Project description: Given the role of SUMOylation in pathogenic infection, we wanted (More)
Made public: 2018-10-19
Non-Small Cell Lung Cancer patients undergoing radical radiotherapy
Species: Homo sapiens (Human)
Project description: Currently there is no predictive marker with clinical utility to (More)
Made public: 2018-10-19
Comparison of proteins in secretory/excretory products of the salmon louse, Lepeophtheirus salmonis.
Species: Lepeophtheirus salmonis
Project description: Comparative Proteomics of the Secretory/Excretory products (SEPs (More)
Made public: 2018-10-19
Combining laser capture micro-dissection and proteomics reveals an active translation machinery controlling invadosome formation
Species: Mus musculus (Mouse)
Project description: We developed a method that combines laser micro-dissection and m (More)
Made public: 2018-10-19
Quantitative proteomic characterization of lung-MSC and bone marrow-MSC using DIA-mass spectrometry
Species: Homo sapiens (Human)
Project description: Mesenchymal stromal cells (MSC) are ideal candidates for cell th (More)
Made public: 2018-10-18
Liver metastatic growth in colorectal cancer depends on PAD4 leading to modification of the extracellular matrix by citrullination
Species: Homo sapiens (Human)
Project description: Colorectal cancer is one of the most frequently occurring malign (More)
Made public: 2018-10-18
SWATH-MS proteomics of seeds of healthy and diseased barley
Species: Hordeum vulgare (Barley)
Project description: Identification and relative quantification of proteins present i (More)
Made public: 2018-10-18
Acetaminophen-induced S-nitrosylation and S-sulfenylation signalling in 3D cultured hepatocarcinoma cell spheroids.
Species: Homo sapiens (Human)
Project description: In this project we have studied human hepatoma cell line grown i (More)
Made public: 2018-10-18
OXIPEP: mass spectrometry strategy to characterize protein carbonylation.
Species: Homo sapiens (Human) Bos taurus (Bovine)
Project description: Here we describe a peptide-centric approach (OXIPEP), where carb (More)
Made public: 2018-10-18
Human hepatic stellate cell-derived extracellular vesicles LC-MSMS
Species: Homo sapiens (Human)
Project description: Activation and migration of hepatic stellate cells (HSCs) follow (More)
Made public: 2018-10-18
Human BAF complex (HA-DPF2 pulldown and SS18-Flag pulldown)
Species: Homo sapiens (Human)
Project description: Mammalian SWI/SNF (mSWI/SNF) ATP-dependent chromatin remodeling (More)
Made public: 2018-10-18
Drosophila BAF complex crosslinking (
Species: Drosophila melanogaster (Fruit fly)
Project description: Mammalian SWI/SNF (mSWI/SNF) ATP-dependent chromatin remodeling (More)
Made public: 2018-10-18
Human pBAF complex (HA-BRD7, PHF10-HA pulldown)
Species: Homo sapiens (Human)
Project description: Mammalian SWI/SNF (mSWI/SNF) ATP-dependent chromatin remodeling (More)
Made public: 2018-10-18
Respiratory complex II
Species: Homo sapiens (Human)
Project description: Alternative assembly of respiratory complex II connects energy s (More)
Made public: 2018-10-18
A TFEB nuclear export signal integrates amino acid supply and glucose availability
Species: Homo sapiens (Human)
Project description: How cells coordinate the response to fluctuating carbon and nitr (More)
Made public: 2018-10-18
Nuclear PTEN safeguards pre-mRNA splicing to link Golgi apparatus for its tumor suppressive role
Species: Homo sapiens (Human)
Project description: Dysregulation of pre-mRNA alternative splicing (AS) is closely a (More)
Made public: 2018-10-18
Candidate Treponema pallidum biomarkers uncovered in human urine samples from MSM individuals with syphilis using a multi-platform mass spectrometry approach
Species: Homo sapiens (Human)
Project description: Background A molecular diagnostic test that could directly evalu (More)
Made public: 2018-10-18
Native mass spectrometry of ClpB
Species: Escherichia coli
Project description: The ATP-dependent bacterial protein disaggregation machine, ClpB (More)
Made public: 2018-10-18
An unprecedented binding mode of vitamin B12 in the predicted transporter BtuM
Species: Thiobacillus denitrificans ATCC 25259
Project description: BtuM binds vitamin B12 (cyano-cobalamin) in an unprecedented way (More)
Made public: 2018-10-18
Analysis of Plasmodium sporozoites collected from mosquito saliva
Species: Anopheles stephensi (Asian malaria mosquito) Anopheles gambiae (African malaria mosquito) Plasmodium falciparum (isolate 3D7) Plasmodium berghei ANKA
Project description: Plasmodium sporozoites are injected, in addition to saliva, into (More)
Made public: 2018-10-18
Nanowell-Mediated Two-Dimensional Liquid Chromatography Proteome Profiling of Mammalian Cells
Species: Homo sapiens (Human)
Project description: Proteomic data from technical developments of a nanowell-mediate (More)
Made public: 2018-10-18
Human FZD6 phosphorylation LC-MS/MS
Species: Homo sapiens (Human)
Project description: Frizzleds (FZD) function as receptors for secreted lipoglycoprot (More)
Made public: 2018-10-18
Npr2-mediated cGMP signalling modulates S-palmitoylation and controls growth cone morphology of DRG neurons
Species: Mus musculus (Mouse)
Project description: A cGMP signalling cascade composed of the ligand C-type natriure (More)
Made public: 2018-10-18
Complementary proteomics strategies identify the ataxin-1 interactome in Neuro-2a cells
Species: Mus musculus (Mouse)
Project description: To identify protein partners of ataxin-1 in neuronal cells under (More)
Made public: 2018-10-18
A non-canonical BRD9-containing BAF chromatin remodeling complex regulates naïve pluripotency in mouse embryonic stem cells
Species: Mus musculus (Mouse)
Project description: The mammalian BRG1-associated factors (BAF) complex is a multi-s (More)
Made public: 2018-10-18
Proteomic response to the thaxtomin phytotoxin elicitor cellobiose and to the deletion of the cellulose utilization regulator CebR in Streptomyces scabies
Species: Streptomyces scabiei 87.22
Project description: Streptomyces scabies is a plant pathogen responsible for common (More)
Made public: 2018-10-18
SILAC proteomics analysis to discover effect sensors of EGFR inhibition
Species: Homo sapiens (Human)
Project description: Targeted therapies against EGFR show clinical benefit, but resis (More)
Made public: 2018-10-18
Systematic substrate identification reveals a central role for the metalloprotease ADAM10 in axon targeting and synapse function
Species: Mus musculus (Mouse)
Project description: Metzincin metalloproteases have major roles in intercellular com (More)
Made public: 2018-10-18
Grape berry development
Species: Vitis vinifera (Grape)
Project description: Grapevine is a popular fruit crop worldwide with essential econo (More)
Made public: 2018-10-18
Proteomic analysis of exported chaperone/co-chaperone complexes of P. falciparum reveals an array of complex protein-protein interactions
Species: Plasmodium falciparum Homo sapiens (Human)
Project description: Project describe: The P. falciparum export 300-400 proteins duri (More)
Made public: 2018-10-18
Evaluation of scoring functions and peptide exposure by fractionation
Species: Homo sapiens (Human)
Project description: Evaluation of sensitivity and accuracy of widely used scoring fu (More)
Made public: 2018-10-18
PCP39: prostate cancer proteome for 39 patients by PCT-SWATH
Species: Homo sapiens (Human)
Project description: here we processed 105 biopsy-level tissues from 39 prostate canc (More)
Made public: 2018-10-17
The bulk cell density as decisive parameter and simple method for mesendodermal patterning of human pluripotent stem cells
Species: Homo sapiens (Human)
Project description: We showed that the relation of pluripotent stem cell count to cu (More)
Made public: 2018-10-17
QuaNCAT analysis comparing proteins synthesized in neurites and soma in ASCL1-iNeurons
Species: Mus musculus (Mouse)
Project description: Local translation in ASCL1-iNeurons was probed using QuaNCAT (More)
Made public: 2018-10-17
Mouse sciatic nerve LC-MSMS
Species: Mus musculus (Mouse)
Project description: The peripheral nervous system (PNS) regenerates after injury. Ho (More)
Made public: 2018-10-17
Staphylococcus aureus coinfection
Species: Staphylococcus aureus subsp. aureus
Project description: The present work comprises the study of wound pathogenic bacteri (More)
Made public: 2018-10-17
Sexual dimorphic correlation of IGFBP-2 and -3 with vitamin D status
Species: Homo sapiens (Human)
Project description: The aim of this cross-sectional study was to identify novel sero (More)
Made public: 2018-10-17
Correction of cognitive deficits in mouse models of Down syndrome by pharmacological inhibitor of DYRK1A
Species: Mus musculus (Mouse)
Project description: Down Syndrome (DS) results from the trisomy of human chromosome (More)
Made public: 2018-10-17
Proteomic analysis of HMGA1-silencing
Species: Homo sapiens (Human)
Project description: HMGA1 is a well-established oncogene and is a master regulator i (More)
Made public: 2018-10-17
Identifying Kinase Substrates via a Heavy ATP Kinase Assay and Quantitative Mass Spectrometry
Species: Homo sapiens (Human)
Project description: Mass spectrometry‐based in vitro kinase screens play an essentia (More)
Made public: 2018-10-17
Characterization of an equine alpha-S2-casein variant
Species: Equus caballus (Horse)
Project description: Two major forms of equine αS2-casein arising from genomic 1.3 kb (More)
Made public: 2018-10-17
PTSD mouse prelimbic cortex and hippocampus
Species: Mus musculus (Mouse)
Project description: Posttraumatic stress disorder (PTSD) is a prevalent psychiatric (More)
Made public: 2018-10-17
PTSD mouse anterior cingulate cortex proteome
Species: Mus musculus (Mouse)
Project description: Posttraumatic stress disorder (PTSD) is a prevalent psychiatric (More)
Made public: 2018-10-17
PTSD mouse brain proteome
Species: Mus musculus (Mouse)
Project description: Posttraumatic stress disorder (PTSD) is a prevalent psychiatric (More)
Made public: 2018-10-17
Mining the cellular inventory of pyridoxal phosphate-dependent enzymes with functionalized cofactor mimics
Species: Staphylococcus aureus
Project description: Pyridoxal phosphate (PLP) is an enzyme cofactor required for the (More)
Made public: 2018-10-17
MCF-7 phosphoproteome LC-MS/MS
Species: Homo sapiens (Human)
Project description: MCF-7 cells were stimulated with TNF-alpha in order to identify (More)
Made public: 2018-10-17
The role of PER1/2 and feeding rhythms in daily oscillations of mitochondrial nutrient utilization and rate-limiting enzymes
Species: Mus musculus (Mouse)
Project description: Mitochondria are major suppliers of cellular energy through nutr (More)
Made public: 2018-10-17
Proteomics of C. briggsae embryo and larvae
Species: Caenorhabditis elegans
Project description: To gain mechanistic insights into the molecular changes of Caeno (More)
Made public: 2018-10-17
Utilization of alpha- and beta-mannan by marine Flavobacteriia
Species: Salegentibacter sp. Hel_I_6
Project description: About one half of the global, biogenic carbon dioxide fixation i (More)
Made public: 2018-10-17
Utilization of alpha- and beta-mannan by marine Flavobacteriia
Species: Leeuwenhoekiella sp. MAR_2009_132
Project description: About one half of the global, biogenic carbon dioxide fixation i (More)
Made public: 2018-10-17
Purification and characterization of a novel allergenic walnut vicilin-like protein
Species: Juglans regia (English walnut)
Project description: Walnuts are potent inducers of food allergic symptoms. So far, f (More)
Made public: 2018-10-17
Hsp90-downregulation influences the heat-shock response, innate immune response and onset of oocyte development in nematodes.
Species: Caenorhabditis elegans
Project description: Hsp90 is a molecular chaperone involved in the regulation and ma (More)
Made public: 2018-10-17
AMPA-receptor specific biogenesis complexes control synaptic transmission and intellectual ability
Species: Rattus norvegicus (Rat) Mus musculus (Mouse)
Project description: AMPA-type glutamate receptors (AMPARs), key elements in excitato (More)
Made public: 2018-10-17
Proteome Profiling Identifies Markers for Inflammation-Related Tumor-Fibroblast Interaction in Colorectal Cancer
Species: Homo sapiens (Human)
Project description: Inflammation has been identified as an important factor in cance (More)
Made public: 2018-10-17
Role of proteins belonging to the OMP biogenesis machinery for virulence of Yersinia enterocolitica
Species: Yersinia enterocolitica
Project description: The outer membrane (OM) of Gram-negative bacteria acts as a phys (More)
Made public: 2018-10-17
RNA polymerase II Immunoprecipitation from Arabidopsis LC-MSMS
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: RNA polymerase II (Pol II) was immunoprecipitated from Arabidops (More)
Made public: 2018-10-17
Structural determinants of specificity and antagonistic Ca2+ and Zn2+ regulation of peptidase activity in human KLK8/neuropsin
Species: Escherichia coli
Project description: Human KLK8/neuropsin, a kallikrein-related serine peptidase, is (More)
Made public: 2018-10-17
Proteomics analysis of podocytes with alpha-galactosidase knockdown
Species: Homo sapiens (Human)
Project description: We subjected human podocytes with and without alpha-Galactosidas (More)
Made public: 2018-10-17
Proteomic analysis of cultured primary urinary cells from M. Fabry Patients
Species: Homo sapiens (Human)
Project description: We analyzed the proteome of primary urinary cells from patients (More)
Made public: 2018-10-17
Cross-linking MS data of CtNup82-Y complex
Species: Chaetomium thermophilum
Project description: XL-MS Data of the in vitro reconstituted CtNup82-Y complex. (More)
Made public: 2018-10-17
Displacement Chromatography Mode – High protein sequence coverages and identification rates for low µg-range proteomics using online 2D-LC-MS
Species: Homo sapiens (Human)
Project description: In bottom-up proteomics, the complexity of proteomes is still a (More)
Made public: 2018-10-17
Protein expression in MOCK and neuronal nitric oxide synthase 1 (NOS1) transduced SH-SY5Y human neuroblastoma cells on stimulation with rapamycin or serum free starvation
Species: Homo sapiens (Human)
Project description: Neuronal nitric oxide synthase (nNOS/NOS1) is upregulated in the (More)
Made public: 2018-10-17
TMT-based quantitative analysis of brain whole proteome of miR-137 mouse models
Species: Mus musculus (Mouse)
Project description: Recent genetic evidence has revealed microRNA-137 (miR-137) as a (More)
Made public: 2018-10-17
Probing the contribution of individual polypeptide GalNAc-transferase isoforms to the O-glycoproteome by inducible expression in isogenic cell lines
Species: Homo sapiens (Human)
Project description: The GalNAc-type O-glycoproteome is orchestrated by a large famil (More)
Made public: 2018-10-16
Arsenic targets Pin1 and cooperates with retinoic acid to inhibit cancer-driving pathways and tumor-initiating cells
Species: Homo sapiens (Human)
Project description: Arsenic trioxide (ATO) and all-trans retinoic acid (ATRA) combin (More)
Made public: 2018-10-16
Identification of proteins in the Salmonella SPI-1 type III secretion injectisome needle complex
Species: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Project description: We determined the cryo-EM structure of the type III secretion in (More)
Made public: 2018-10-16
Cell wall proteome of wheat developing grain
Species: Triticum aestivum (Wheat)
Project description: The aim of this project is to highlight cell wall proteome of wh (More)
Made public: 2018-10-16
Low pH-responsive proteins revealed by a 2-DE based MS approach and related physiological responses in Citrus leaves
Species: Citrus maxima (Pomelo) (Citrus grandis)
Project description: After long-term low pH treatment, 2D electrophoresis and mass sp (More)
Made public: 2018-10-16
Project title: 20170712-Leslie-1
Species: Drosophila melanogaster (Fruit fly)
Project description: 190 proteins were identified from three samples. Among them41 pr (More)
Made public: 2018-10-16
SNX3-retromer requires an evolutionary conserved MON2:DOPEY2:ATP9A complex to mediate Wntless sorting and Wnt secretion
Species: Homo sapiens (Human)
Project description: Wntless transports Wnt morphogens to the cell surface and is req (More)
Made public: 2018-10-16
C16-ceramide is a natural regulatory ligand of p53 in cellular stress response
Species: Homo sapiens (Human)
Project description: Ceramides are important participants of signal transduction, reg (More)
Made public: 2018-10-16
Proteomics of CLIC4 overexpressing human pulmonary artery endothelial cells
Species: Homo sapiens (Human)
Project description: To identify CLIC4 effectors by studying proteins expressiosn al (More)
Made public: 2018-10-16
CLIC4 interacting proteins
Species: Homo sapiens (Human)
Project description: To identify proteins in human pulmonary artery endothelial cells (More)
Made public: 2018-10-16
Proteomics Analysis of Escherichia coli Persisters
Species: Escherichia coli
Project description: Persisters, a dormant and multi-drug tolerant subpopulation that (More)
Made public: 2018-10-16
Trans-splicing of class I HLA bound peptides diversifies the immunopeptidome
Species: Homo sapiens (Human)
Project description: The diversity of peptides displayed by class I HLA plays an esse (More)
Made public: 2018-10-16
Hit-Gel: Streamlining in-gel protein digestion for high-throughput proteomics experiments.
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: Traditional in gel-digestion procedures require extensive sample (More)
Made public: 2018-10-16
Hit-Gel: Streamlining in-gel protein digestion for high-throughput proteomics experiments.
Species: Arabidopsis thaliana (Mouse-ear cress)
Project description: Traditional in gel-digestion procedures require extensive sample (More)
Made public: 2018-10-16
SseF-SscB Interaction
Species: Salmonella enterica subsp. enterica serovar Typhimurium
Project description: Bacterial type III secretion systems are able to secrete membran (More)
Made public: 2018-10-16
Co-IP (AP-MS) of Connexin-43
Species: Homo sapiens (Human)
Project description: Co-IP Experiment Bait: Cx43-Flag Cell line: Hela Related Publica (More)
Made public: 2018-10-16

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