Project PXD009933

PRIDE Assigned Tags:
Biological Dataset

Summary

Title

proteomic analysis of gamma-tocotienol(GT3)-treated human diploid fibroblasts (HDFs)

Description

the proteomes of untreated and GT3-treated HDFs were compared

Sample Processing Protocol

whole protein was extracted with ripa in-gel. 1 sample divided into 6 faction. Subjced to LCMS/MS run.

Data Processing Protocol

proteins were identified and quantified by MaxQuant, DEPs were identifeid by Perseus, Gene ontology for DEPs was annotated by Panther Classification System.

Contact

Jen-Kit Tan, National University of Malaysia
Jen-Kit Tan, Department of Biochemsitry, Faculty of Medicine, UKM, Malaysia ( lab head )

Submission Date

28/05/2018

Publication Date

06/12/2018

Cell Type

fibroblast

Instrument

Q Exactive

Software

Not available

Experiment Type

Shotgun proteomics

Publication

    Tan JK, Jaafar F, Makpol S. Proteomic profiling of senescent human diploid fibroblasts treated with gamma-tocotrienol. BMC Complement Altern Med. 2018 18(1):314 PubMed: 30497457