Project PXD006367
PRIDE Assigned Tags:
Biological DatasetDownload Project Files
Project Protein Table
Project Peptide Table
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Summary
Title
Cross-sectional association of salivary proteins with age, sex, body mass index, smoking, and education
Description
In a cross-sectional approach, we analyzed the influence of age, sex, body mass index (BMI), smoking, and education on salivary protein signatures in whole saliva samples of 187 individuals. Subjects were randomly selected from the population-based Study of Health in Pomerania (SHIP-Trend).
Sample Processing Protocol
- sample collection with Salivette (Sarstedt, Nümbrecht, Germany) - TCA precipitation of proteins - tryptic digestion - desalting of digests with ZipTip µC-18 - data dependent LC-MS/MS measurement on nano-UPLC/LTQ Orbitrap Velos
Data Processing Protocol
- data processing via Genedata Expressionist software package - identification via Mascot algorithm
Contact
Annette Murr, University Medicine Greifswald
Uwe Völker, Department of Functional Genomics, Interfaculty Institute for Genetics and Functional Genomics, University Medicine Greifswald, Greifswald, Germany (
lab head )
Submission Date
24/04/2017
Publication Date
16/05/2017
Species
Tissue
Instrument
Software
Not available
Quantification
Not available
Experiment Type
Assay count
Publication
Murr A, Pink C, Hammer E, Michalik S, Dhople VM, Holtfreter B, Völker U, Kocher T, Gesell Salazar M. Cross-sectional association of salivary proteins with age, sex, body mass index, smoking, and education. J Proteome Res. 2017 May 8 PubMed: 28481548
Assay
| # | Accession | Title | Proteins | Peptides | Unique Peptides | Spectra | Identified Spectra | View in Reactome |
|---|---|---|---|---|---|---|---|---|
| 11 | 76130 | 10_batch1.dat-pride-filtered.xml | 666 | 3934 | 1604 | 15728 | 0 |
|
| 12 | 76131 | 110_batch8.dat-pride-filtered.xml | 1018 | 4718 | 2401 | 16636 | 0 |
|
| 13 | 76132 | 111_batch8.dat-pride-filtered.xml | 1111 | 5039 | 2609 | 17119 | 0 |
|
| 14 | 76133 | 112_batch8.dat-pride-filtered.xml | 1015 | 4429 | 2330 | 17063 | 0 |
|
| 15 | 76134 | 113_batch8.dat-pride-filtered.xml | 892 | 4081 | 2050 | 16332 | 0 |
|
| 16 | 76135 | 114_batch8.dat-pride-filtered.xml | 1222 | 5526 | 2872 | 17224 | 0 |
|
| 17 | 76136 | 115_batch8.dat-pride-filtered.xml | 1193 | 5460 | 2814 | 17030 | 0 |
|
| 18 | 76137 | 116_batch8.dat-pride-filtered.xml | 833 | 3938 | 1899 | 16653 | 0 |
|
| 19 | 76138 | 117_batch8.dat-pride-filtered.xml | 1053 | 5189 | 2537 | 17223 | 0 |
|
| 20 | 76139 | 118_batchR.dat-pride-filtered.xml | 1160 | 5148 | 2777 | 17965 | 0 |
|