Project PXD002982

PRIDE Assigned Tags:
Biomedical Dataset
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Summary

Title

Mouse lung proteome response to a wild type infectious clone of H7N9 Influenza virus and mutants

Description

Proteomic data from mouse lung; Treated with wild-type and mutant H7N9 and mockulum; Time points 1, 2, 4 & 7 days; 5 biological replicates

Sample Processing Protocol

Samples were digested with trypsin then analyzed by LC-MS/MS

Data Processing Protocol

Data was searched with MSGF+ using PNNL's DMS Processing pipeline

Contact

Matthew Monroe, Pacific Northwest National Laboratory
Thomas Metz, Pacific Northwest National Laboratory, USA ( lab head )

Submission Date

28/09/2015

Publication Date

06/10/2015

Tissue

lung

Modification

Oxidation
Carbamidomethyl

Quantification

Not available

Experiment Type

Shotgun proteomics

Assay count

71

Publication

Publication pending

Assay

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Showing 1 - 10 of 71 results
# Accession Title Proteins Peptides Unique Peptides Spectra Identified Spectra View in Reactome
1 58050 no assay title provided (mzIdentML) 8787 15459 14021 14997 14028
2 58051 no assay title provided (mzIdentML) 9548 15573 14489 15676 13951
3 58052 no assay title provided (mzIdentML) 8949 16138 14557 15659 14688
4 58053 no assay title provided (mzIdentML) 9281 15020 14012 15038 13455
5 58091 no assay title provided (mzIdentML) 9238 15809 14366 15474 14274
6 58054 no assay title provided (mzIdentML) 8503 15175 13565 15057 13905
7 58090 no assay title provided (mzIdentML) 9021 14664 13600 14678 13204
8 58055 no assay title provided (mzIdentML) 8905 15552 14054 15274 14136
9 58093 no assay title provided (mzIdentML) 9652 16036 14839 15673 14441
10 58056 no assay title provided (mzIdentML) 8972 15152 13831 15111 13674