Project PXD000944

PRIDE Assigned Tags:
Biomedical Dataset
Download Project Files
Project Protein Table
Project Peptide Table
Visualize in PRIDE Inspector
Follow the next three steps to open your selected project or assay in PRIDE Inspector:

  • 1.

    Download, uncompress and open PRIDE Inspector
  • 2.

    Click in the magnifier on the left top corner, paste the project or assay that you would like to open in the search box, and hit search
  • 3.

    Click in the corresponding "Download" button to download the files and visualize them

Summary

Title

BRCA protein subtype

Description

Shotgun MSMS data of breast tumor intrinsic subtypes

Sample Processing Protocol

Will be added. This text is only added to make the entry at least 50 characters long.

Data Processing Protocol

Will be added. This text is only added to make the entry at least 50 characters long.

Contact

Fredrik Levander, Lund University, Department of Immunotechnology
Peter James, Department of Immunotechnology, Lund University ( lab head )

Submission Date

30/04/2014

Publication Date

08/07/2016

Disease

breast cancer

Quantification

Not available

Experiment Type

Bottom-up proteomics

Assay count

109

Publication

    Cifani P, Kirik U, Waldemarson S, James P. Molecular Portrait of Breast-Cancer-Derived Cell Lines Reveals Poor Similarity with Tumors. J Proteome Res. 2015 Jul 2;14(7):2819-27 PubMed: 26055192

Assay

Page 1 2 3 4 5 ... 11
Page size 10 20 50 100
Showing 1 - 10 of 109 results
# Accession Title Proteins Peptides Unique Peptides Spectra Identified Spectra View in Reactome
1 36302 BRCA Orbi 2011 (3/109) 407 1327 1265 12693 1244
2 36303 BRCA Orbi 2011 (4/109) 343 977 901 10443 904
3 36300 BRCA Orbi 2011 (5/109) 462 1486 1329 12157 1330
4 36301 BRCA Orbi 2011 (6/109) 389 1343 1236 11846 1237
5 36306 BRCA Orbi 2011 (7/109) 424 1221 1063 9842 1079
6 36307 BRCA Orbi 2011 (8/109) 568 1506 1387 11739 1373
7 36304 BRCA Orbi 2011 (9/109) 523 1150 1097 10659 1077
8 36305 BRCA Orbi 2011 (10/109) 583 1768 1589 11497 1563
9 36295 BRCA Orbi 2011 (11/109) 376 1606 1362 12838 1349
10 36294 BRCA Orbi 2011 (12/109) 362 1380 1337 12892 1308