Project PXD000001

Dataset Belongs to:
PRIME-XS Project
Download Project Files
Project Protein Table
Project Peptide Table
Visualize in PRIDE Inspector
Follow the next three steps to open your selected project or assay in PRIDE Inspector:

  • 1.

    Download, uncompress and open PRIDE Inspector
  • 2.

    Click in the magnifier on the left top corner, paste the project or assay that you would like to open in the search box, and hit search
  • 3.

    Click in the corresponding "Download" button to download the files and visualize them

Summary

Title

TMT spikes

Description

Expected reporter ion ratios: Erwinia peptides: 1:1:1:1:1:1 Enolase spike (sp|P00924|ENO1_YEAST): 10:5:2.5:1:2.5:10 BSA spike (sp|P02769|ALBU_BOVIN): 1:2.5:5:10:5:1 PhosB spike (sp|P00489|PYGM_RABIT): 2:2:2:2:1:1 Cytochrome C spike (sp|P62894|CYC_BOVIN): 1:1:1:1:1:2

Sample Processing Protocol

See details in reference(s) : 23692960

Data Processing Protocol

Two extra files have been added post-publication:
TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01-20141210.mzML
TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01-20141210.mzXML

Contact

Laurent Gatto, Department of Biochemistry, University of Cambridge

Submission Date

13/03/2012

Publication Date

07/03/2012

Corresponding dataset(s) in other omics resources

Dataset visualisation in external resources

PPV000014 (MS-Viewer)

Tissue

Not available

Experiment Type

Bottom-up proteomics

Assay count

1

Publication

    Gatto L, Christoforou A; Using R and Bioconductor for proteomics data analysis., Biochim Biophys Acta, 2013 May 18, PubMed: 23692960

Assay

Showing 1 - 1 of 1 results
# Accession Title Proteins Peptides Unique Peptides Spectra Identified Spectra View in Reactome
1 22134 TMT_Erwinia_1uLSike_Top10HCD_isol2_45stepped_60min_01 496 2382 1846 6103 2281