PRIDE Archive - proteomics data repository

The PRIDE PRoteomics IDEntifications (PRIDE) database is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence. PRIDE is a core member in the ProteomeXchange (PX) consortium, which provides a single point for submitting mass spectrometry based proteomics data to public-domain repositories. Datasets are submitted to PRIDE via ProteomeXchange and are handled by expert biocurators.

Submit data: PX Submission Tool
MS/MS Proteomics Submission Desktop Tool
Tools: PRIDE Inspector
Distribution of Precursos Ion Masses
Access data: Proteome Central
Accessible ProteomeXchange datasets
Tools: PRIDE Inspector
Protein Table
Access data: PRIDE Archive Web Service
Swagger Documentation
Tools: PRIDE Inspector
Protein Inference
Tools: PRIDE Inspector
Quantitation View
Access data: PRIDE Archive
Results Page
Tools: PRIDE Inspector
Protein Details
Access data: PRIDE Archive Web Service
JSON Output

Datasets

  • 8410 projects
  • 78989 assays

News

Feb 09
Would you like to work with us? Looking for a Scientific Curator to join the team. Deadline: March 4th. link Please RT
Feb 09
(2/2) … a public repository such as @proteomeXchange (@pride_ebi or MASSIVE), or CHORUS, or an equivalent one when the paper is submitted”.
Feb 09
(1/2) Just out in JPR, editorial from @JohnRYatesIII. It is stated: “As of January 1, 2018, JPR will require SUBMISSION OF RAW DATA to …
Feb 06
Have also participated in “ProForma: a Standard Proteoform Notation”, just out at JPR. @TopDownProteome link #proteoform
More news

Submit data

Submit data: we welcome direct submissions of MS/MS proteomics datasets.

ProteomeXchange: accepts both MS/MS proteomics submissions and SRM submissions. PRIDE is the official entry point for MS/MS proteomics submissions.

Access data

Browse: explore all public datasets currently available in our repository.

Web Service: Use the PRIDE Archive web services to get programmatic access to data in the PRIDE repository.

Download: our servers provide data files via FTP, Aspera and HTTP.

Tools

PRIDE Inspector: a desktop application for visualizinig and analyzing MS dataset, such as: mzML, mzIdentML, PRIDE XML.

PRIDE Converter: converts common mass spectrometry data formats into PRIDE XML.