PRIDE Archive - proteomics data repository

The PRIDE PRoteomics IDEntifications (PRIDE) database is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence. PRIDE is a core member in the ProteomeXchange (PX) consortium, which provides a single point for submitting mass spectrometry based proteomics data to public-domain repositories. Datasets are submitted to PRIDE via ProteomeXchange and are handled by expert biocurators.

Submit data: PX Submission Tool
MS/MS Proteomics Submission Desktop Tool
Tools: PRIDE Inspector
Distribution of Precursos Ion Masses
Access data: Proteome Central
Accessible ProteomeXchange datasets
Tools: PRIDE Inspector
Protein Table
Access data: PRIDE Archive Web Service
Swagger Documentation
Tools: PRIDE Inspector
Protein Inference
Tools: PRIDE Inspector
Quantitation View
Access data: PRIDE Archive
Results Page
Tools: PRIDE Inspector
Protein Details
Access data: PRIDE Archive Web Service
JSON Output

New Pride Web

A new PRIDE web will be released by December 2018, you can check: Beta Version

Datasets

  • 10459 projects
  • 85105 assays

News

Nov 05
RT @ypriverol: One of the nice resource from @pride_ebi developer team this year: more than 180 complete submissions map to @ensembl genome…
Nov 05
RT @ypriverol: Finally out: The PRIDE database & related tools, resources in 2019: improving support for quantification data. @pride_ebi Th…
Nov 05
Our @pride_ebi 2019 update article (the first in 3 years) is just out @NAR_Research. Interesting read if you want t… link
Nov 01
RT @pride_ebi: Dear users of @pride_ebi we are open to feedback about the new improvements on experimental design annotation. Feel free ema…
More news

Submit data

Submit data: we welcome direct submissions of MS/MS proteomics datasets.

ProteomeXchange: accepts both MS/MS proteomics submissions and SRM submissions. PRIDE is the official entry point for MS/MS proteomics submissions.

Access data

Browse: explore all public datasets currently available in our repository.

Web Service: Use the PRIDE Archive web services to get programmatic access to data in the PRIDE repository.

Download: our servers provide data files via FTP, Aspera and HTTP.

Tools

PRIDE Inspector: a desktop application for visualizinig and analyzing MS dataset, such as: mzML, mzIdentML, PRIDE XML.

PRIDE Converter: converts common mass spectrometry data formats into PRIDE XML.