PRIDE Archive - proteomics data repository

The PRIDE PRoteomics IDEntifications (PRIDE) database is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence. PRIDE is a core member in the ProteomeXchange (PX) consortium, which provides a single point for submitting mass spectrometry based proteomics data to public-domain repositories. Datasets are submitted to PRIDE via ProteomeXchange and are handled by expert biocurators.

Submit data: PX Submission Tool
MS/MS Proteomics Submission Desktop Tool
Tools: PRIDE Inspector
Distribution of Precursos Ion Masses
Access data: Proteome Central
Accessible ProteomeXchange datasets
Tools: PRIDE Inspector
Protein Table
Access data: PRIDE Archive Web Service
Swagger Documentation
Tools: PRIDE Inspector
Protein Inference
Tools: PRIDE Inspector
Quantitation View
Access data: PRIDE Archive
Results Page
Tools: PRIDE Inspector
Protein Details
Access data: PRIDE Archive Web Service
JSON Output

New Pride Web

A new PRIDE web will be released by December 2018, you can check: Beta Version

Datasets

  • 12635 projects
  • 92762 assays

News

Jun 19
RT @ypriverol: Today @bjoerngruening presented @BioContainers 2.0 at #ELIXIR19. The recent work of the @BioContainers community link
Jun 17
RT @AndrewJarnuczak: This is how we @pride_ebi bring your #proteomics data to various #bioinformatics resources at EBI. #OpenData link
Jun 17
@macro_momo Thanks for your feedback. We are aware, but we haven't implemented it yet since 1) not easy to implemen… link
Jun 11
Would you like to join our team @emblebi? A 3-year "Bioinformatician – #Proteomics data pipelines" position just op… link
More news

Submit data

Submit data: we welcome direct submissions of MS/MS proteomics datasets.

ProteomeXchange: accepts both MS/MS proteomics submissions and SRM submissions. PRIDE is the official entry point for MS/MS proteomics submissions.

Access data

Browse: explore all public datasets currently available in our repository.

Web Service: Use the PRIDE Archive web services to get programmatic access to data in the PRIDE repository.

Download: our servers provide data files via FTP, Aspera and HTTP.

Tools

PRIDE Inspector: a desktop application for visualizinig and analyzing MS dataset, such as: mzML, mzIdentML, PRIDE XML.

PRIDE Converter: converts common mass spectrometry data formats into PRIDE XML.