PRIDE Archive - proteomics data repository

The PRIDE PRoteomics IDEntifications (PRIDE) database is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence. PRIDE is a core member in the ProteomeXchange (PX) consortium, which provides a single point for submitting mass spectrometry based proteomics data to public-domain repositories. Datasets are submitted to PRIDE via ProteomeXchange and are handled by expert biocurators.

Submit data: PX Submission Tool
MS/MS Proteomics Submission Desktop Tool
Tools: PRIDE Inspector
Distribution of Precursos Ion Masses
Access data: Proteome Central
Accessible ProteomeXchange datasets
Tools: PRIDE Inspector
Protein Table
Access data: PRIDE Archive Web Service
Swagger Documentation
Tools: PRIDE Inspector
Protein Inference
Tools: PRIDE Inspector
Quantitation View
Access data: PRIDE Archive
Results Page
Tools: PRIDE Inspector
Protein Details
Access data: PRIDE Archive Web Service
JSON Output

New Pride Web

A new PRIDE web will be released by December 2018, you can check: Beta Version

Datasets

  • 11069 projects
  • 87428 assays

News

Jan 03
Just out @NatureBiotech "Comprehensive identification of RNA–protein interactions in any organism using orthogonal… link
Dec 29
@emblebi @ewanbirney Congratulations from the @pride_ebi team!
Dec 24
Happy holidays to everyone and all the best for 2019! We are now on holiday till the beginning of the New Year!
Dec 19
Hello, the last time we process submissions this year is this coming Friday, the 21st of December. Happy Holidays!… link
More news

Submit data

Submit data: we welcome direct submissions of MS/MS proteomics datasets.

ProteomeXchange: accepts both MS/MS proteomics submissions and SRM submissions. PRIDE is the official entry point for MS/MS proteomics submissions.

Access data

Browse: explore all public datasets currently available in our repository.

Web Service: Use the PRIDE Archive web services to get programmatic access to data in the PRIDE repository.

Download: our servers provide data files via FTP, Aspera and HTTP.

Tools

PRIDE Inspector: a desktop application for visualizinig and analyzing MS dataset, such as: mzML, mzIdentML, PRIDE XML.

PRIDE Converter: converts common mass spectrometry data formats into PRIDE XML.