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PDBsum entry 9gv8
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PDB id:
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Hydrolase
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Title:
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N-acyl-d-amino-acid deacylase (d-acylase) from klebsiella pneumoniae in the absence of glycerol
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Structure:
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Amidohydrolase family protein. Chain: a. Synonym: d-aminoacylase. Engineered: yes
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Source:
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Klebsiella pneumoniae subsp. Pneumoniae kp13. Organism_taxid: 1123862. Gene: dan, b5l96_17380, b6i68_16395, banra_04485, bl124_00028775, dw281_07100, eao17_17410, fxn67_23300, g4v31_23420, gjj08_023370, gjj13_021835, gjj18_03715, gnf00_21165, nctc11679_04932, nctc13443_01470, nctc5052_02702, nctc9601_05682, nctc9661_05441, qig75_04865, samea3499874_02915, samea3499901_00964, samea3512100_03687, samea3515122_03158, samea3538658_01149, samea3538828_01003, samea3673026_03520, samea3720909_04521,
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Resolution:
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2.60Å
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R-factor:
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0.228
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R-free:
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0.269
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Authors:
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J.A.Gavira,S.Martinez-Rodriguez
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Key ref:
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S.Martinez-Rodriguez
and
j.a.gavira
(2025).
Revisiting d-Acylases for d-Amino acid production..
Microb biotechnol,
18,
70179.
PubMed id:
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Date:
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23-Sep-24
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Release date:
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18-Jun-25
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PROCHECK
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Headers
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References
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W9BIW9
(W9BIW9_KLEPN) -
Amidohydrolase family protein from Klebsiella pneumoniae
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Seq:
Struc:
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479 a.a.
478 a.a.
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Enzyme class 1:
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E.C.3.5.1.-
- ?????
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Enzyme class 2:
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E.C.3.5.1.81
- N-acyl-D-amino-acid deacylase.
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Reaction:
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an N-acyl-D-amino acid + H2O = a D-alpha-amino acid + a carboxylate
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N-acyl-D-amino acid
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+
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H2O
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=
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D-alpha-amino acid
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+
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carboxylate
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Cofactor:
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Zn(2+)
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Note, where more than one E.C. class is given (as above), each may
correspond to a different protein domain or, in the case of polyprotein
precursors, to a different mature protein.
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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Links
