PDBsum entry 9e5h

RNA

PDB id: 9e5h

Contents

DNA/RNA

Ligands

CNC ×2

N3D ×2

TRS ×2

Metals

__K ×2

_MG ×18

Waters ×254

PDB id:

9e5h

Name:

RNA

Title:

Env2 cobalamin riboswitch aptamer domain in complex with cyanocobalamin

Structure:

RNA (76-mer). Chain: a, b. Engineered: yes

Source:

Synthetic: yes. Marine metagenome. Organism_taxid: 408172

Resolution:

2.80Å R-factor: 0.214 R-free: 0.278

Authors:

L.T.Olenginski,R.T.Batey

Key ref:

L.T.Olenginski et al. Designing small molecules targeting a cryptic RNA bin site through base displacement.. Nat.Chem.Biol., . PubMed id: 40883492 DOI: 10.1038/S41589-025-02018-8

Date:

28-Oct-24 Release date: 24-Sep-25

DNA/RNA chains

GTP-G-U-A-A-A-A-G-C-A-U-A-G-U-G-G-G-A-A-A-G-U-G-A-C-G-U-G-A-A-A-U-U-C-G-U-C-C- 76 bases

GTP-G-U-A-A-A-A-G-C-A-U-A-G-U-G-G-G-A-A-A-G-U-G-A-C-G-U-G-A-A-A-U-U-C-G-U-C-C- 76 bases