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PDBsum entry 9dw3

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protein ligands Protein-protein interface(s) links
Structural protein PDB id
9dw3

 

 

 

 

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Contents
Protein chains
(+ 8 more) 181 a.a.
Ligands
BO2 ×14
PDB id:
9dw3
Name: Structural protein
Title: Human mitochondrial clpp in complex with bortezomib
Structure: Atp-dependent clp protease proteolytic subunit, mitochondrial. Chain: a, b, c, d, e, f, g, h, i, j, k, l, m, n. Synonym: endopeptidase clp. Engineered: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: clpp. Expressed in: escherichia coli. Expression_system_taxid: 562
Authors: W.Chen
Key ref: W.C.Chen Assembly and proteolytic activation human clpxp defin cryo-Em. To be published, .
Date:
08-Oct-24     Release date:   15-Oct-25    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q16740  (CLPP_HUMAN) -  ATP-dependent Clp protease proteolytic subunit, mitochondrial from Homo sapiens
Seq:
Struc:
277 a.a.
181 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 4 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.3.4.21.92  - endopeptidase Clp.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: Hydrolysis of proteins to small peptides in the presence of ATP and magnesium. Alpha-casein is the usual test substrate. In the absence of ATP, only oligopeptides shorter than five residues are cleaved (such as succinyl-Leu-Tyr-|-NHMEC; and Leu-Tyr-Leu-|-Tyr-Trp, in which the cleavage of the -Tyr-|-Leu- and -Tyr-|-Trp- bond also occurs).

 

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