PDBsum entry 9c3d

Hydrolase

PDB id: 9c3d

Contents

Protein chain

224 a.a.

Metals

_ZN ×2

Waters ×130

PDB id:

9c3d

Name:

Hydrolase

Title:

Crystal structure of metallo-beta-lactamase superfamily protein ccra- like_mbl-b1 from dyadobacter fermentans

Structure:

Metallo-beta-lactamase type 2. Chain: a. Fragment: unp residues 20-244. Synonym: b2 metallo-beta-lactamase,metallo-beta-lactamase type ii. Engineered: yes

Source:

Dyadobacter fermentans dsm 18053. Organism_taxid: 471854. Gene: dfer_1371. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008. Expression_system_variant: gold.

Resolution:

1.85Å R-factor: 0.189 R-free: 0.211

Authors:

Y.Kim,N.Maltseva,L.Welk,M.Endres,A.Joachimiak,Center For Structural Biology Of Infectious Diseases (Csbid)

Key ref:

Y.Kim et al. Crystal structure of metallo-Beta-Lactamase superfami protein ccra-Like_mbl-B1 from dyadobacter fermentans. To be published, .

Date:

31-May-24 Release date: 17-Jul-24

Protein chain

C6W709  (C6W709_DYAFD) -  beta-lactamase from Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / CIP 107007 / KCTC 52180 / NS114)

Seq: 244 a.a.

Struc: 224 a.a.

Enzyme reactions

• Enzyme class: E.C.3.5.2.6 - beta-lactamase.
• Pathway: Penicillin Biosynthesis and Metabolism
• Reaction: a beta-lactam + H2O = a substituted beta-amino acid
• Cofactor: Zn(2+)