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PDBsum entry 8y1a

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protein ligands Protein-protein interface(s) links
Viral protein PDB id
8y1a

 

 

 

 

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Contents
Protein chains
1208 a.a.
Ligands
NAG-NAG-MAN-MAN-
MAN-MAN
×3
NAG-NAG ×12
NAG ×51
PDB id:
8y1a
Name: Viral protein
Title: 1up-1 conformation of hku1-b s protein after incubation of the receptor
Structure: Spike glycoprotein. Chain: a, b, c. Synonym: s glycoprotein,e2,peplomer protein. Engineered: yes
Source: Human coronavirus hku1 (isolate n2). Organism_taxid: 443240. Gene: s, 3. Expressed in: homo sapiens. Expression_system_taxid: 9606
Authors: L.Y.Xia,Y.Y.Zhang,Q.Zhou
Key ref: L.Xia et al. Structural basis for the recognition of hcov-Hku1 by tmprss2.. Cell res, . PubMed id: 38641728
Date:
24-Jan-24     Release date:   01-May-24    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q14EB0  (SPIKE_CVHN2) -  Spike glycoprotein from Human coronavirus HKU1 (isolate N2)
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1351 a.a.
1208 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 6 residue positions (black crosses)

 

 

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