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PDBsum entry 8vqe

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protein ligands Protein-protein interface(s) links
Signaling protein PDB id
8vqe

 

 

 

 

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JSmol PyMol  
Contents
Protein chains
502 a.a.
Ligands
NAG-NAG ×2
PDB id:
8vqe
Name: Signaling protein
Title: Homodimeric structure of her2 s310f extracellular region
Structure: Receptor tyrosine-protein kinase erbb-2/higg1 fc domain fusion. Chain: a, b. Synonym: metastatic lymph node gene 19 protein,mln 19,proto-oncogene neu,proto-oncogenE C-erbb-2,tyrosine kinase-type cell surface receptor her2,p185erbb2. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: erbb2, her2, mln19, neu, ngl. Expressed in: homo sapiens. Expression_system_taxid: 9606
Authors: I.Bang,S.Koide
Key ref: I.Bang et al. Selective targeting of oncogenic hotspot mutations of her2 extracellular domain.. Nat chem biol, . PubMed id: 39438724
Date:
18-Jan-24     Release date:   06-Nov-24    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
P04626  (ERBB2_HUMAN) -  Receptor tyrosine-protein kinase erbB-2 from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1255 a.a.
502 a.a.*
Key:    Secondary structure
* PDB and UniProt seqs differ at 1 residue position (black cross)

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+
ADP
Bound ligand (Het Group name = NAG)
matches with 41.38% similarity
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

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