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PDBsum entry 8twb

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protein dna_rna ligands metals Protein-protein interface(s) links
DNA binding protein/DNA PDB id
8twb

 

 

 

 

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Contents
Protein chains
319 a.a.
327 a.a.
340 a.a.
338 a.a.
258 a.a.
258 a.a.
DNA/RNA
Ligands
AGS ×3
ADP
Metals
_MG ×3
PDB id:
8twb
Name: DNA binding protein/DNA
Title: Cryo-em structure of s. Cerevisiae ctf18-rfc-pcna-DNA complex
Structure: Replication factor c subunit 4. Chain: 4. Engineered: yes. Replication factor c subunit 3. Chain: 3. Engineered: yes. Replication factor c subunit 2. Chain: 2. Engineered: yes.
Source: Saccharomyces cerevisiae. Brewer's yeast. Organism_taxid: 4932. Gene: rfc4. Expressed in: saccharomyces cerevisiae. Expression_system_taxid: 4932. Gene: rfc3. Gene: rfc2. Gene: rfc5.
Authors: Z.Yuan,R.Georgescu,M.O'Donnell,H.Li
Key ref: Z.Yuan et al. Cryo-Em reveals that ctf18-Rfc collaborates with pole load the pcna clamp onto a leading strand DNA. To be published, . PubMed id: 39088616
Date:
20-Aug-23     Release date:   04-Sep-24    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
P40339  (RFC4_YEAST) -  Replication factor C subunit 4 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Seq:
Struc:
323 a.a.
319 a.a.
Protein chain
Pfam   ArchSchema ?
P38629  (RFC3_YEAST) -  Replication factor C subunit 3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Seq:
Struc:
340 a.a.
327 a.a.
Protein chain
Pfam   ArchSchema ?
P40348  (RFC2_YEAST) -  Replication factor C subunit 2 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Seq:
Struc:
353 a.a.
340 a.a.
Protein chain
Pfam   ArchSchema ?
P38251  (RFC5_YEAST) -  Replication factor C subunit 5 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Seq:
Struc:
354 a.a.
338 a.a.
Protein chain
Pfam   ArchSchema ?
P49956  (CTF18_YEAST) -  Chromosome transmission fidelity protein 18 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Seq:
Struc:
 
Seq:
Struc:
741 a.a.
258 a.a.
Protein chains
Pfam   ArchSchema ?
P15873  (PCNA_YEAST) -  Proliferating cell nuclear antigen from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Seq:
Struc:
258 a.a.
258 a.a.
Key:    PfamA domain  Secondary structure

DNA/RNA chains
  A-G-C-A-G-C-A-A-C-A-G-A-G-A-A-T-C-T 18 bases
  A-G-A-T-T-C-T-C-T-G-T-T-G-C-T-G-C 17 bases

 

 

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