spacer
spacer

PDBsum entry 8s2q

Go to PDB code: 
protein ligands metals links
Oxidoreductase PDB id
8s2q

 

 

 

 

Loading ...

 
JSmol PyMol  
Contents
Protein chain
333 a.a.
Ligands
GLC-FRU
SO4 ×6
Metals
_CU ×2
Waters ×561
PDB id:
8s2q
Name: Oxidoreductase
Title: High ph (8.0) as-isolated msox movie series dataset 2 of the copper nitrite reductase (nirk) from bradyrhizobium japonicum usda110 [0.7 mgy]
Structure: Copper-containing nitrite reductase. Chain: a. Engineered: yes
Source: Bradyrhizobium sp.. Organism_taxid: 376. Strain: ors375. Gene: nirk. Expressed in: escherichia coli bl21. Expression_system_taxid: 511693.
Resolution:
1.05Å     R-factor:   0.115     R-free:   0.130
Authors: S.L.Rose,F.M.Ferroni,S.Horrell,C.D.Brondino,R.R.Eady,S.Jaho, M.A.Hough,A.L.Owen,S.V.Antonyuk,S.S.Hasnain
Key ref: S.L.Rose et al. Spectroscopically validated ph-Dependent msox movies detailed mechanism of copper nitrite reductases.. J mol biol, . PubMed id: 39002715
Date:
18-Feb-24     Release date:   24-Jul-24    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
Q89EJ6  (Q89EJ6_BRADU) -  Copper-containing nitrite reductase from Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
Seq:
Struc:
367 a.a.
333 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.1.7.2.1  - nitrite reductase (NO-forming).
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: nitric oxide + Fe(III)-[cytochrome c] + H2O = Fe(II)-[cytochrome c] + nitrite + 2 H+
nitric oxide
+ Fe(III)-[cytochrome c]
+ H2O
= Fe(II)-[cytochrome c]
+ nitrite
+ 2 × H(+)
      Cofactor: Cu cation or Fe cation; FAD
Cu cation
or Fe cation
FAD
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

spacer

spacer