PDBsum entry 8io2

Lyase

PDB id: 8io2

Contents

Protein chains

(+ 2 more) 415 a.a.

195 a.a.

(+ 2 more) 149 a.a.

PDB id:

8io2

Name:

Lyase

Title:

The rubisco assembly intermidate of arabidopsis thaliana rubisco accumulation factor 1 (atraf1) and rubisco large subunit (rbcl)

Structure:

Ribulose bisphosphate carboxylase large chain. Chain: a, b, c, d, e, f, g, h. Synonym: rubisco large subunit. Engineered: yes. Rubisco accumulation factor 1.2, chloroplastic. Chain: i, j, k, l, m, n, o, p, q. Engineered: yes

Source:

Synechococcus sp. (Strain atcc 27144 / pcc 6301 / saug 1402/1). Organism_taxid: 269084. Strain: atcc 27144 / pcc 6301 / saug 1402/1. Gene: cbbl, rbca, rbcl, syc0130_c. Expressed in: escherichia coli bl21(de3). Expression_system_taxid: 469008. Arabidopsis thaliana. Thale cress.

Authors:

R.Wang,H.Song,W.Zhang,N.Wang,S.Zhang,R.Shao

Key ref:

R.Wang et al. Structural insight into the functions of raf1 and bsd hexadecameric rubisco assembly.. Mol plant, . PubMed id: 37853692

Date:

10-Mar-23 Release date: 01-Nov-23

Protein chains

P00880  (RBL_SYNP6) -  Ribulose bisphosphate carboxylase large chain from Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)

Seq: 472 a.a.

Struc: 415 a.a.

Protein chain

Q9SR19  (RAF2_ARATH) -  Rubisco accumulation factor 1.2, chloroplastic from Arabidopsis thaliana

Seq: 449 a.a.

Struc: 195 a.a.

Protein chains

Q9SR19  (RAF2_ARATH) -  Rubisco accumulation factor 1.2, chloroplastic from Arabidopsis thaliana

Seq: 449 a.a.

Struc: 149 a.a.

Enzyme reactions

• Enzyme class: Chains A, B, C, D, E, F, G, H: E.C.4.1.1.39 - ribulose-bisphosphate carboxylase.
• Reaction: 2 (2R)-3-phosphoglycerate + 2 H⁺ = D-ribulose 1,5-bisphosphate + CO2 + H2O

Molecule diagrams generated from .mol files obtained from the KEGG ftp site