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PDBsum entry 8hmg

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protein ligands metals Protein-protein interface(s) links
Plant protein PDB id
8hmg

 

 

 

 

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Contents
Protein chains
(+ 3 more) 287 a.a.
Ligands
SO4 ×20
Metals
_CA ×27
_MG ×9
Waters ×477
PDB id:
8hmg
Name: Plant protein
Title: The open state of rglg2-vwa
Structure: E3 ubiquitin-protein ligase rglg2. Chain: a, b, c, d, e, f, g, h, i. Fragment: vwa domain. Synonym: ring domain ligase 2. Engineered: yes
Source: Arabidopsis thaliana. Mouse-ear cress. Organism_taxid: 3702. Gene: rglg2, at5g14420, f18o22.210. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.81Å     R-factor:   0.185     R-free:   0.208
Authors: Q.Wang
Key ref: Q.Wang Ca2+-Based allosteric switches and shape shifting in vwa domain. To be published, .
Date:
03-Dec-22     Release date:   06-Dec-23    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q9LY87  (RGLG2_ARATH) -  E3 ubiquitin-protein ligase RGLG2 from Arabidopsis thaliana
Seq:
Struc:
468 a.a.
287 a.a.
Key:    PfamA domain  Secondary structure

 Enzyme reactions 
   Enzyme class: E.C.2.3.2.27  - RING-type E3 ubiquitin transferase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N6- ubiquitinyl-[acceptor protein]-L-lysine

 

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