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PDBsum entry 8hc6
Go to PDB code:
Viral protein/immune system
PDB id
8hc6
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Contents
Protein chains
267 a.a.
214 a.a.
215 a.a.
237 a.a.
Ligands
NAG
×7
PDB id:
8hc6
Links
PDBe
RCSB
MMDB
JenaLib
Proteopedia
CATH
SCOP
PDBSWS
ProSAT
Name:
Viral protein/immune system
Title:
Sars-cov-2 omicron ba.1 spike trimer (6p) in complex with yb9-258 fab, focused refinement of fab region
Structure:
Spike protein s1. Chain: c. Engineered: yes. Heavy chain of yb9-258 fab. Chain: h. Engineered: yes. Light chain of yb9-258. Chain: l. Engineered: yes.
Source:
Severe acute respiratory syndrome coronavirus 2. Organism_taxid: 2697049. Gene: s, 2. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_cell_line: hek293. Homo sapiens. Organism_taxid: 9606.
Authors:
B.Liu,X.Gao,Q.Chen,Z.Li,M.Su,J.He,X.Xiong
Key ref:
H.Yu et al. Sars-Cov-2 breakthrough infections induce somatically hypermutated broadly neutralizing antibodies against heterologous variants.
To be published
, .
PubMed id:
36828833
Date:
01-Nov-22
Release date:
25-Jan-23
PROCHECK
Headers
References
Protein chain
P0DTC2
(SPIKE_SARS2) - Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2
Seq:
Struc:
Seq:
Struc:
Seq:
Struc:
1273 a.a.
267 a.a.
*
Protein chain
No UniProt id for this chain
Struc:
214 a.a.
Protein chain
No UniProt id for this chain
Struc:
215 a.a.
Protein chain
P0DTC2
(SPIKE_SARS2) - Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2
Seq:
Struc:
Seq:
Struc:
Seq:
Struc:
1273 a.a.
237 a.a.
*
Key:
PfamA domain
Secondary structure
*
PDB and UniProt seqs differ at 19 residue positions (black crosses)
Links
