PDBsum entry 8h3d

Viral protein

PDB id: 8h3d

Contents

Protein chains

1023 a.a.

Ligands

NAG ×13

PDB id:

8h3d

Name:

Viral protein

Title:

Structure of apo sars-cov-2 spike protein with one rbd up

Structure:

Spike glycoprotein,fibritin. Chain: a, b, c. Fragment: sars-cov-2 spike protein,sars-cov-2 spike protein. Synonym: s glycoprotein,e2,peplomer protein,collar protein,whisker antigen control protein. Engineered: yes. Mutation: yes

Source:

Severe acute respiratory syndrome coronavirus 2. Organism_taxid: 2697049. Gene: s, 2, wac. Expressed in: homo sapiens. Expression_system_taxid: 9606.

Authors:

F.Meng,Q.Wang,Y.Xie,X.Ni,N.Huang

Key ref:

Q.Wang et al. (2023). In silico discovery of small molecule modulators targ the achilles' Heel of sars-Cov-2 spike protein.. Acs cent sci, 9, 252. PubMed id: 36844485

Date:

08-Oct-22 Release date: 22-Mar-23

Protein chains

P0DTC2  (SPIKE_SARS2) -  Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2

Seq: 1273 a.a.

Struc: 1023 a.a.*

Protein chains

P10104  (WAC_BPT4) -  Fibritin from Enterobacteria phage T4

Seq: 487 a.a.

Struc: 1023 a.a.*

* PDB and UniProt seqs differ at 424 residue positions (black crosses)