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PDBsum entry 8emh

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protein dna_rna Protein-protein interface(s) links
Antimicrobial protein PDB id
8emh

 

 

 

 

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Contents
Protein chains
(+ 6 more) 672 a.a.
DNA/RNA
PDB id:
8emh
Name: Antimicrobial protein
Title: Cryoem characterization of a unique aaa+ brxl phage restriction factor
Structure: Protease lon-related brex system protein brxl. Chain: a, b, c, d, e, f, g, h, i, j, k, l. Engineered: yes. DNA (64-mer). Chain: o. Engineered: yes. DNA (63-mer). Chain: p. Engineered: yes
Source: Acinetobacter sp. Neb 394. Organism_taxid: 2743575. Gene: brxl, huk62_18280. Expressed in: escherichia coli. Expression_system_taxid: 562. Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Organism_taxid: 32630
Authors: B.W.Shen,B.L.Stoddard
Key ref: B.W.Shen and b.l.stoddard Structure, Substrate binding and activity of a unique protein: the brxl phage restriction factor. Nucleic acids res, . PubMed id: 36794719
Date:
27-Sep-22     Release date:   01-Feb-23    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
A0A7H8SL14  (A0A7H8SL14_9GAMM) -  Protease Lon-related BREX system protein BrxL from Acinetobacter sp. NEB 394
Seq:
Struc:
 
Seq:
Struc:
679 a.a.
672 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 1 residue position (black cross)

DNA/RNA chains
  A-C-G-C-G-C-T-A-C-A-C-T-A-A-A-A-G-G-G-C-C-C-T-T-A-A-T-T-C-G-A-T-C-G-A-C-T-A-A- 64 bases
  C-A-G-T-C-G-A-T-C-G-A-T-A-A-A-G-G-G-G-C-C-C-T-T-T-C-T-T-A-G-T-C-G-A-T-C-G-A-A- 63 bases

 

 

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