PDBsum entry 8d1v

RNA binding protein/RNA

PDB id: 8d1v

Contents

Protein chain

1229 a.a.

DNA/RNA

Metals

_ZN ×4

PDB id:

8d1v

Name:

RNA binding protein/RNA

Title:

Cryo-em structure of guide RNA and target RNA bound cas7-11

Structure:

Crispr-associated ramp family protein. Chain: a. Engineered: yes. Crispr RNA (34-mer). Chain: j. Engineered: yes. Ss target RNA (5'- r(p Ap Gp Cp Up Up Gp Gp Up Up Cp Ap Ap Ap Gp Ap Ap Cp G)-3'). Chain: n.

Source:

Desulfonema ishimotonii. Organism_taxid: 45657. Gene: denis_1082. Expressed in: escherichia coli. Expression_system_taxid: 562. Expression_system_taxid: 562

Authors:

J.Rai,H.Goswami,H.Li

Key ref:

H.N.Goswami et al. (2022). Molecular mechanism of active cas7-11 in processing c RNA and interfering target RNA.. Elife, 11, . PubMed id: 36190192

Date:

27-May-22 Release date: 02-Nov-22

Protein chain

A0A401FT36  (A0A401FT36_9BACT) -  CRISPR-associated RAMP family protein from Desulfonema ishimotonii

Seq: 1601 a.a.

Struc: 1229 a.a.

DNA/RNA chains

U-U-G-A-U-G-U-C-A-C-G-G-A-A-C-A-C-G-U-U-C-U-U-U-G-A-A-C-C-A-A-G-C-U 34 bases

A-G-C-U-U-G-G-U-U-C-A-A-A-G-A-A-C-G 18 bases