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PDBsum entry 8cii

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protein ligands Protein-protein interface(s) links
Virus PDB id
8cii

 

 

 

 

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Contents
Protein chains
185 a.a.
217 a.a.
211 a.a.
221 a.a.
211 a.a.
123 a.a.
Ligands
NAG-NAG-BMA-FUC
PDB id:
8cii
Name: Virus
Title: Delta-rbd complex with ba.2-07 fab, sars1-34 fab and c1 nanobody
Structure: Spike protein s2'. Chain: e. Engineered: yes. Sars1-34 fab heavy chain. Chain: h. Engineered: yes. Sars1-34 fab light chain. Chain: l. Engineered: yes.
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: s, 2. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expressed in: cricetulus griseus. Expression_system_taxid: 10029. Lama glama.
Authors: H.M.E.Duyvesteyn,J.Ren,D.I.Stuart,E.E.Fry
Key ref: H.M.E.Duyvesteyn et al. Potent cross-Reactive mabs from ba.4/5 breakthrough infection. To be published, .
Date:
09-Feb-23     Release date:   21-Feb-24    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
P0DTC2  (SPIKE_SARS2) -  Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1273 a.a.
185 a.a.*
Protein chain
No UniProt id for this chain
Struc: 217 a.a.
Protein chain
No UniProt id for this chain
Struc: 211 a.a.
Protein chain
No UniProt id for this chain
Struc: 221 a.a.
Protein chain
No UniProt id for this chain
Struc: 211 a.a.
Protein chain
No UniProt id for this chain
Struc: 123 a.a.
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 2 residue positions (black crosses)

 

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