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PDBsum entry 8a2d

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protein ligands links
Transferase PDB id
8a2d

 

 

 

 

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Contents
Protein chain
281 a.a.
Ligands
EDO
MES
KXY
Waters ×387
PDB id:
8a2d
Name: Transferase
Title: Egfr kinase domain (l858r/v948r) in complex with 2-[4- (difluoromethyl)-6-[2-[4-[[4-(hydroxymethyl)-1- piperidyl]methyl]phenyl]ethynyl]-7-methyl-indazol-2-yl]-2-spiro[6,7- dihydropyrrolo[1,2-c]imidazole-5,1'-cyclopropane]-1-yl-n-thiazol-2- yl-acetamide
Structure: Epidermal growth factor receptor. Chain: a. Synonym: proto-oncogenE C-erbb-1,receptor tyrosine-protein kinase erbb-1. Engineered: yes. Mutation: yes
Source: Homo sapiens. Human. Organism_taxid: 9606. Gene: egfr, erbb, erbb1, her1. Expressed in: spodoptera frugiperda. Expression_system_taxid: 7108
Resolution:
1.11Å     R-factor:   0.164     R-free:   0.179
Authors: A.Kuglstatter,A.Ehler
Key ref: U.Obst-Sander et al. (2022). Discovery of novel allosteric egfr l858r inhibitors f treatment of non-Small-Cell lung cancer as a single a in combination with osimertinib.. J.Med.Chem., 65, 13052. PubMed id: 36178776 DOI: 10.1021/ACS.JMEDCHEM.2C00893
Date:
03-Jun-22     Release date:   19-Oct-22    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chain
Pfam   ArchSchema ?
P00533  (EGFR_HUMAN) -  Epidermal growth factor receptor from Homo sapiens
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1210 a.a.
281 a.a.*
Key:    PfamA domain  Secondary structure
* PDB and UniProt seqs differ at 7 residue positions (black crosses)

 Enzyme reactions 
   Enzyme class: E.C.2.7.10.1  - receptor protein-tyrosine kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: L-tyrosyl-[protein] + ATP = O-phospho-L-tyrosyl-[protein] + ADP + H+
L-tyrosyl-[protein]
+ ATP
= O-phospho-L-tyrosyl-[protein]
+ ADP
+ H(+)
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 

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