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PDBsum entry 7ynb

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protein dna_rna links
RNA binding protein PDB id
7ynb

 

 

 

 

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Contents
Protein chain
1536 a.a.
DNA/RNA
PDB id:
7ynb
Name: RNA binding protein
Title: Cryo-em structure of cas7-11-crrna bound to target RNA-2
Structure: Crispr-associated ramp family protein. Chain: a. Synonym: cas7-11. Engineered: yes. Crrna (38-mer). Chain: b. Engineered: yes. Target RNA-2 (28-mer). Chain: c.
Source: Desulfonema ishimotonii. Organism_taxid: 45657. Gene: denis_1082. Expressed in: escherichia coli. Expression_system_taxid: 562. Expression_system_taxid: 562
Authors: Y.Huo,Q.Dong,H.Zhao,T.Jiang
Key ref: Y.Huo et al. Cryo-Em structure of cas7-11-Crrna bound to target rn. To be published, . PubMed id: 36702942
Date:
30-Jul-22     Release date:   01-Feb-23    
PROCHECK
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 Headers
 References

Protein chain
Pfam   ArchSchema ?
A0A401FT36  (A0A401FT36_9BACT) -  CRISPR-associated RAMP family protein from Desulfonema ishimotonii
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
 
Seq:
Struc:
1601 a.a.
1536 a.a.
Key:    PfamA domain  Secondary structure

DNA/RNA chains
  U-U-G-A-U-G-U-C-A-C-G-G-A-A-C-A-G-G-A-A-C-U-U-G-A-A-C-A-A-C-A-U-C-G-U-U-A-C 38 bases
  U-A-G-U-A-A-C-G-A-U-G-U-U-G-U-U-C-A-A-G-U-U-C-C-U-G-U-U 28 bases

 

 

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