PDBsum entry 7uml

Viral protein/RNA

PDB id: 7uml

Contents

Protein chains

379 a.a.

171 a.a.

34 a.a.

39 a.a.

17 a.a.

DNA/RNA

PDB id:

7uml

Name:

Viral protein/RNA

Title:

Structure of vesicular stomatitis virus (local reconstruction, 3.5 a resolution)

Structure:

Nucleoprotein. Chain: a, d, e. Synonym: np,nucleocapsid protein,protein n. Engineered: yes. Matrix protein. Chain: b, c, f. Synonym: m protein. Engineered: yes. RNA (5'-r(p Up Up Up Up Up Up Up Up Up Up Up Up U)-3').

Source:

Vesicular stomatitis indiana virus. Organism_taxid: 11277. Expressed in: mesocricetus auratus. Expression_system_taxid: 10036. Expression_system_taxid: 10036

Authors:

S.Jenni,J.A.Horwitz,L.-M.Bloyet,S.P.J.Whelan,S.C.Harrison

Key ref:

S.Jenni et al. Visualizing molecular interactions that determine ass of a bullet-Shaped vesicular stomatitis virus particl. Biorxiv, . PubMed id: 35970826

Date:

07-Apr-22 Release date: 20-Apr-22

Protein chain

P03521  (NCAP_VSIVA) -  Nucleoprotein from Vesicular stomatitis Indiana virus (strain San Juan)

Seq: 422 a.a.

Struc: 379 a.a.

Protein chains

P03519  (MATRX_VSIVA) -  Matrix protein from Vesicular stomatitis Indiana virus (strain San Juan)

Seq: 229 a.a.

Struc: 171 a.a.*

Protein chain

P03521  (NCAP_VSIVA) -  Nucleoprotein from Vesicular stomatitis Indiana virus (strain San Juan)

Seq: 422 a.a.

Struc: 34 a.a.

Protein chain

P03521  (NCAP_VSIVA) -  Nucleoprotein from Vesicular stomatitis Indiana virus (strain San Juan)

Seq: 422 a.a.

Struc: 39 a.a.

Protein chain

P03519  (MATRX_VSIVA) -  Matrix protein from Vesicular stomatitis Indiana virus (strain San Juan)

Seq: 229 a.a.

Struc: 17 a.a.

* PDB and UniProt seqs differ at 1 residue position (black cross)

DNA/RNA chain

U-U-U-U-U-U-U-U-U-U-U-U-U 13 bases

Enzyme reactions

• Enzyme class: Chains A, B, C, D, E, F: E.C.?