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PDBsum entry 7ode
Go to PDB code:
Ribosome
PDB id
7ode
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Contents
Protein chains
226 a.a.
183 a.a.
165 a.a.
142 a.a.
122 a.a.
120 a.a.
114 a.a.
117 a.a.
103 a.a.
110 a.a.
93 a.a.
102 a.a.
62 a.a.
56 a.a.
46 a.a.
DNA/RNA
PDB id:
7ode
Links
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ProSAT
Name:
Ribosome
Title:
E. Coli 50s ribosome licl core particle
Structure:
23s rrna. Chain: i. Other_details: a1618 is not methylated in strain jw5107-1. 50s ribosomal protein l2. Chain: k. Synonym: large ribosomal subunit protein ul2. 50s ribosomal protein l3. Chain: l. Synonym: large ribosomal subunit protein ul3.
Source:
Escherichia coli k-12. Organism_taxid: 83333. Organism_taxid: 83333
Authors:
D.S.D.Larsson,M.Selmer
Key ref:
D.S.D.Larsson et al. Cryo-Em reconstructions of licl core particles mimic assembly intermediates.
To be published
, .
PubMed id:
36358955
Date:
29-Apr-21
Release date:
01-Jun-22
PROCHECK
Headers
References
Protein chain
?
P60422
(RL2_ECOLI) - Large ribosomal subunit protein uL2 from Escherichia coli (strain K12)
Seq:
Struc:
273 a.a.
226 a.a.
Protein chain
?
P60438
(RL3_ECOLI) - Large ribosomal subunit protein uL3 from Escherichia coli (strain K12)
Seq:
Struc:
209 a.a.
183 a.a.
Protein chain
?
P60723
(RL4_ECOLI) - Large ribosomal subunit protein uL4 from Escherichia coli (strain K12)
Seq:
Struc:
201 a.a.
165 a.a.
Protein chain
?
P0AA10
(RL13_ECOLI) - Large ribosomal subunit protein uL13 from Escherichia coli (strain K12)
Seq:
Struc:
142 a.a.
142 a.a.
Protein chain
?
P0ADY3
(RL14_ECOLI) - Large ribosomal subunit protein uL14 from Escherichia coli (strain K12)
Seq:
Struc:
123 a.a.
122 a.a.
Protein chain
?
P0AG44
(RL17_ECOLI) - Large ribosomal subunit protein bL17 from Escherichia coli (strain K12)
Seq:
Struc:
127 a.a.
120 a.a.
Protein chain
?
P0A7K6
(RL19_ECOLI) - Large ribosomal subunit protein bL19 from Escherichia coli (strain K12)
Seq:
Struc:
115 a.a.
114 a.a.
Protein chain
?
P0A7L3
(RL20_ECOLI) - Large ribosomal subunit protein bL20 from Escherichia coli (strain K12)
Seq:
Struc:
118 a.a.
117 a.a.
Protein chain
?
P0AG48
(RL21_ECOLI) - Large ribosomal subunit protein bL21 from Escherichia coli (strain K12)
Seq:
Struc:
103 a.a.
103 a.a.
Protein chain
?
P61175
(RL22_ECOLI) - Large ribosomal subunit protein uL22 from Escherichia coli (strain K12)
Seq:
Struc:
110 a.a.
110 a.a.
Protein chain
?
P0ADZ0
(RL23_ECOLI) - Large ribosomal subunit protein uL23 from Escherichia coli (strain K12)
Seq:
Struc:
100 a.a.
93 a.a.
Protein chain
?
P60624
(RL24_ECOLI) - Large ribosomal subunit protein uL24 from Escherichia coli (strain K12)
Seq:
Struc:
104 a.a.
102 a.a.
Protein chain
?
P0A7M6
(RL29_ECOLI) - Large ribosomal subunit protein uL29 from Escherichia coli (strain K12)
Seq:
Struc:
63 a.a.
62 a.a.
Protein chain
?
P0A7N4
(RL32_ECOLI) - Large ribosomal subunit protein bL32 from Escherichia coli (strain K12)
Seq:
Struc:
57 a.a.
56 a.a.
Protein chain
?
P0A7P5
(RL34_ECOLI) - Large ribosomal subunit protein bL34 from Escherichia coli (strain K12)
Seq:
Struc:
46 a.a.
46 a.a.
Key:
PfamA domain
Secondary structure
DNA/RNA chain
G-G-U-U-A-A-G-C-G-A-C-U-A-A-G-C-G-U-A-C-A-C-G-G-U-G-G-A-U-G-C-C-C-U-G-G-C-A-G-
...
1990 bases
Links
