PDBsum entry 7n8h

Viral protein/immune system

PDB id: 7n8h

Contents

Protein chains

999 a.a.

104 a.a.

122 a.a.

106 a.a.

121 a.a.

Ligands

NAG-NAG-FUC ×3

NAG-NAG ×6

NAG ×39

Waters ×771

PDB id:

7n8h

Name:

Viral protein/immune system

Title:

Sars-cov-2 s (b.1.429 / epsilon variant) + s2m11 + s2l20 global refinement

Structure:

Spike glycoprotein. Chain: a, f, k. Synonym: s glycoprotein,e2,peplomer protein. Engineered: yes. S2m11 fab light chain variable region. Chain: d, g, l. Engineered: yes. S2m11 fab heavy chain variable region. Chain: e, h, m.

Source:

Severe acute respiratory syndrome coronavirus 2. 2019-ncov, sars-cov-2. Organism_taxid: 2697049. Variant: b.1.427/b.1.429 (epsilon). Gene: s, 2. Expressed in: homo sapiens. Expression_system_taxid: 9606. Homo sapiens.

Authors:

M.Mccallum,D.Veesler,Seattle Structural Genomics Center For Infectious Disease (Ssgcid)

Date:

14-Jun-21 Release date: 14-Jul-21

Protein chains

P0DTC2  (SPIKE_SARS2) -  Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2

Seq: 1273 a.a.

Struc: 999 a.a.*

Protein chains

No UniProt id for this chain

Struc: 104 a.a.

Protein chains

No UniProt id for this chain

Struc: 122 a.a.

Protein chains

No UniProt id for this chain

Struc: 106 a.a.

Protein chains

No UniProt id for this chain

Struc: 121 a.a.

* PDB and UniProt seqs differ at 7 residue positions (black crosses)