PDBsum entry 7l4z

Viral protein

PDB id: 7l4z

Contents

Protein chains

199 a.a.

17 a.a.

Ligands

NAG ×7

PDB id:

7l4z

Name:

Viral protein

Title:

Structure of sars-cov-2 spike rbd in complex with cyclic peptide

Structure:

Spike protein s1. Chain: b, d, a, c, e. Fragment: receptor-binding domain (rbd). Synonym: s glycoprotein,e2,peplomer protein,spike glycoprotein. Engineered: yes. Ace-dty-lys-ala-gly-val-val-tyr-gly-tyr-asn-ala-trp-ile- arg-cys-nh2. Chain: s, t, r, u, v. Engineered: yes

Source:

Severe acute respiratory syndrome coronavirus 2. 2019-ncov. Organism_taxid: 2697049. Gene: s, 2. Expressed in: homo sapiens. Expression_system_taxid: 9606. Expression_system_cell_line: expi293. Synthetic: yes.

Resolution:

3.96Å R-factor: 0.258 R-free: 0.282

Authors:

M.Christie,J.P.Mackay,T.Passioura,R.J.Payne

Key ref:

A.Norman et al. Discovery of cyclic peptide ligands to the sars-Cov-2 protein using mRNA display. To be published, . PubMed id: 34230894

Date:

21-Dec-20 Release date: 30-Jun-21

Protein chains

P0DTC2  (SPIKE_SARS2) -  Spike glycoprotein from Severe acute respiratory syndrome coronavirus 2

Seq: 1273 a.a.

Struc: 199 a.a.

Protein chains

No UniProt id for this chain

Struc: 16 a.a.