PDBsum entry 7jlc

DNA

PDB id: 7jlc

Contents

DNA/RNA

PDB id:

7jlc

Name:

DNA

Title:

Self-assembly of a 3d DNA crystal lattice (4x6 scramble duplex version) containing the j21 immobile holliday junction with r3 symmetry

Structure:

DNA (5'- d( Gp Ap Ap Cp Gp Ap Cp Ap Cp Tp Gp Ap Cp Gp Tp Gp Gp Ap Cp Tp C)- 3'). Chain: b. Engineered: yes. DNA (5'-d( Tp Cp Gp Ap Gp Tp Cp C)-3'). Chain: c. Engineered: yes. DNA (5'-d(p Gp Tp Gp Tp Cp Gp T)-3').

Source:

Synthetic: yes. Synthetic construct. Organism_taxid: 32630. Organism_taxid: 32630

Resolution:

3.06Å R-factor: 0.208 R-free: 0.236

Authors:

C.R.Simmons,T.Macculloch,N.Stephanopoulos,H.Yan

Key ref:

C.R.Simmons et al. (2022). The influence of holliday junction sequence and dynam DNA crystal self-Assembly.. Nat commun, 13, 3112. PubMed id: 35662248

Date:

29-Jul-20 Release date: 14-Jul-21

DNA/RNA chains

G-A-A-C-G-A-C-A-C-T-G-A-C-G-T-G-G-A-C-T-C 21 bases

T-C-G-A-G-T-C-C 8 bases

G-T-G-T-C-G-T 7 bases

A-C-G-T-C-A 6 bases