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PDBsum entry 7g3c
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PDB id:
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Hydrolase
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Title:
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Crystal structure of rat autotaxin in complex with 2-(3,4- dichlorophenyl)-1-[8-[(4-fluorophenyl)methyl]-3,4-dihydro-1h- isoquinolin-2-yl]ethanone, i.E. Smiles fc1ccc(cc1)cc1c2cn(c(=o) cc3ccc(cl)c(cl)c3)ccc2ccc1 with ic50=0.769073 microm
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Structure:
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Isoform 2 of ectonucleotide pyrophosphatase/phosphodiesterase family member 2. Chain: a. Fragment: residues 1-862. Synonym: e-npp 2,autotaxin,extracellular lysophospholipase d,lysopld. Engineered: yes. Mutation: yes
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Source:
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Rattus norvegicus. Norway rat. Organism_taxid: 10116. Gene: enpp2, atx, npps2. Expressed in: homo sapiens. Expression_system_taxid: 9606.
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Resolution:
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1.68Å
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R-factor:
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0.175
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R-free:
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0.205
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Authors:
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M.Stihle,J.Benz,D.Hunziker,P.Mattei,M.G.Rudolph
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Key ref:
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D.Hunziker
et al.
Crystal structure of a rat autotaxin complex.
To be published,
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Date:
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05-Jun-23
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Release date:
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18-Dec-24
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PROCHECK
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Headers
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References
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Q64610
(ENPP2_RAT) -
Autotaxin from Rattus norvegicus
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Seq:
Struc:
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887 a.a.
807 a.a.*
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Key: |
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PfamA domain |
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Secondary structure |
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*
PDB and UniProt seqs differ
at 2 residue positions (black
crosses)
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Enzyme class:
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E.C.3.1.4.39
- alkylglycerophosphoethanolamine phosphodiesterase.
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Reaction:
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a 1-O-alkyl-sn-glycero-3-phosphoethanolamine + H2O = a 1-O-alkyl- sn-glycero-3-phosphate + ethanolamine + H+
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1-O-alkyl-sn-glycero-3-phosphoethanolamine
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+
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H2O
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=
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1-O-alkyl- sn-glycero-3-phosphate
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+
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ethanolamine
Bound ligand (Het Group name = )
matches with 60.00% similarity
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+
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H(+)
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Molecule diagrams generated from .mol files obtained from the
KEGG ftp site
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Links
